Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01947 ATGACGTGGAAAAGTAGAGGTGAGTTTCCTTCTAGAAGCTTCGTATCGCAGAAATGGACGCTTTTTCTCTGTCTCGGTAGTTTCTGTGCTGGAATGCTCTTCACTAACAGGATATGGAGTATTCCAGAACAAAATGGACTTGCGAGACCAACAGCTGCAGAAACTGGTAAAATGGATGTAGTTTCAGAGGGTTGTAATTCCAGAATTTTGCAAGAGATGGAAATGAGGCGCGAAAATAGAGATATGTATGGCGAAGACTTCAAGGGTCATAATTCTATACAAGCTTTGGATAAAACTATTTCAAGTTTAGAGATGGACTTGGCTACTGCAAGGGCTGTTCAAGAGTCGGTAAGGAGTGGTGCTCCTGTTTCAGATGATATAAGGACGAATGAATCGTCGGGTAAGAGAAAGTACCTTATGGTAGTAGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGGGCTACCTGGATGCCACAAGGTGACAAAAGAAAGAAGCTAGAGGAAGAGAAAGGCATTGTCATGCGCTTTGTTATTGGACACAGTGCTACATCAGGAGGTATCCTAGACAGAGCTATTGAAGCAGAGGACAGAAAGCACGGAGATTTCTTGAGGCTGAACCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACCAAGACATATTTTGCCACTGCTGTGAGCTTATGGGATGCCGACTTCTACGTCAAAGTTGATGACGATGTTCATGTAAATATAGCTACATTGGGAGAAACTCTAGTTAGACACCGATCGAAACAACGGATATACATTGGATGCATGAAATCTGGACCTGTCCTGTCTCAAAAAGGGGTAAGGTACCATGAACCCGAACATTGGAAGTTTGGCGAGTCGGGAAACAAGTATTTCCGCCATGCCACAGGGCAGTTGTATGCTATTTCAAACGATTTGGCAACATACATATCGAACAACCATAATGTTCTTCACAAGTATGCCAATGAGGACGTGTCAATAGGAGCTTGGTTTATTGGACTTGATGTCGAGCATATCGATGATCGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAATGGAAGGCGCAAGCAGGCAACATTTGCGTCGCTTCATTTGATTGGAGCTGCAGCGGTATATGTAGGTCTGCCGACAGGATAAAAGAAGTACATAGAAGGTGCGGTGAAGGTGAAAATGCTTTGTGGAGTGCCTCTTTCTAG 1224 0.4379 MTWKSRGEFPSRSFVSQKWTLFLCLGSFCAGMLFTNRIWSIPEQNGLARPTAAETGKMDVVSEGCNSRILQEMEMRRENRDMYGEDFKGHNSIQALDKTISSLEMDLATARAVQESVRSGAPVSDDIRTNESSGKRKYLMVVGINTAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVSLWDADFYVKVDDDVHVNIATLGETLVRHRSKQRIYIGCMKSGPVLSQKGVRYHEPEHWKFGESGNKYFRHATGQLYAISNDLATYISNNHNVLHKYANEDVSIGAWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSASF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01947 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Vivi5g01947 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi5g01947 407 Gene3D - 133 352 - -
Vivi5g01947 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 98 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi5g01947 407 FunFam Hexosyltransferase 132 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01947 Vivi-Chr5 74565762 74570008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01947 1 407 Glycosyltransferase AT1G05170 77.150 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01947 K20855 - gmx:100794838 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01947 5 74565762 74570008 Vivi5g01947 5 74565762 74570008 ECH
Vivi5g01947 5 74565762 74570008 Vivi1g00238 1 4616759 4624172 ECH