Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00238 ATGGTTATAGGGATCAATACAGCTTTTAGTAGCAGGAAGCGAAGAGATTCTGTTCGACAAACTTGGATGCCGCAAGCTGAGGATAGAAAGAAATTGGAGGACGAAAAGGGCATAGTCATACGTTTTGTTATAGGTCACAGTTCTACATTTGGTGGAATTCTTGACAAAGCTATTGAAGCTGAGGAAAAGCTCCATGCTGACTTTTTGAGGCTGAATCATGTCGAGGGATACATGGAATTATCAGCTAAGACGAAAACATACTTTTCAACCGCTGTTGCTTTGTGGGATGCAGAATTTTATGTCAAAGTTGATGATGATGTTCATGTGAATTTAGCAACACTTGGGTCAACTCTGAGTATGCACCGTATGAAACCTCGGGTGTATGTTGGGTGCATGAAATCTGGTCCCGTCCTTGCTCAGAGGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGTGAGGTTGGAAACAAGTACTTTCGTCATGCTACTGGACAATTATATGCCATTTCACAAGATTTGGCAACTTATATTTCGATAAATCAGGATGTGCTGCATAAATATGCGAATGAAGATGTTTCGTTAGGATCATGGTTCATAGGTTTAGATGTGGAACATATCGACGATAGGAGAATATGTTGCGGTTCACCACCAGATTGTGAGTGGAAGGCTCAAGCAGGTAATACGTGCATTGCTACATTTGATTGGAAATGCAGCGGGATTTGCCGGTCTGCTATGAGGATGAAGTATGTTCACGAGCGTTGCGGAGAGGATGAAAATGCACTGTGGAGCACAACTTTTTGA 807 0.4213 MVIGINTAFSSRKRRDSVRQTWMPQAEDRKKLEDEKGIVIRFVIGHSSTFGGILDKAIEAEEKLHADFLRLNHVEGYMELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGSTLSMHRMKPRVYVGCMKSGPVLAQRGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISINQDVLHKYANEDVSLGSWFIGLDVEHIDDRRICCGSPPDCEWKAQAGNTCIATFDWKCSGICRSAMRMKYVHERCGEDENALWSTTF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00238 268 Gene3D - 1 212 - -
Vivi1g00238 268 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 210 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi1g00238 268 FunFam Hexosyltransferase 1 214 - -
Vivi1g00238 268 Pfam Galactosyltransferase 13 210 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00238 Vivi-Chr1 4616759 4624172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00238 1 268 Glycosyltransferase AT1G05170 80.970 5.85e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00238 K20855 - gmx:100810168 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00238 1 4616759 4624172 Vivi1g00238 1 4616759 4624172 ECH
Vivi5g01947 5 74565762 74570008 Vivi1g00238 1 4616759 4624172 ECH