Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01771 ATGGTTGACGGTGAACCTCCACCGCGTCTTCAGGGAAAATTTACTGCAACAGTGGTTTGTTGGCTTCTTGGCAATGGAGTTCTTTTCTGTTGGAATAGTATGCTCACAATTCAAGATTACTATGTTTCTTTGTTTCCGAATTACCATCCCGCTAGAGTTCTTAGTCTTGTATATCAACCATTTGCATTTGGAACACTAGCAATACTAGCTTATAACGAGGCGAAAATCAATACAAGGCAGCGGAATCTATTCGGATTCGCGCTCTTTTTCTTCGGCGTTTTGGCTGTGTTAATTTTGGACTTAGCAACATCTGGTAAAGGAGGGATTGGAACTTACATTGGCATATGTATGGTTAGTGGTGTGTTTGGAATAGCAGATGCTAATGCACAAGGTGGAATGATTGGAGATTTGTCCTACATGCATCCGGAACTTCTTCAGTCTTTCCTTGCTGGTGAAGCAGCATCGGGCGCGCTAACATCTGCTTTGAGGTTAATTACCAAAGCTGCATTTGATAATTCTCAGGACGGTCTTCGCAAAGGAGCAATTCTGTTCTTTTCTATATCAACATTCTTTGTGCTTCTTTGTCTTGTTCTCTATGGATTTGTATTTCCTAAACTACCAATTGTGAAGTACTACCGATCAAAAGCAGCGTCTGAAGGGTCAAAAACTGTTTCTTCCGACCTTGCTGCAGCTGGCATTCATTCTGAAACCGGAGAATCAAGACAATTTGAGCGCAAGGAAAATAAAGAATTGTTAATGGAAAACATTGATTATGCACTTAATTTGTTTATGATATATTTGTTGACATTGTCGATATTCCCTGGATTCTTAACAGAAGATACCGGAAAACACAGTTTAGGCACATGGTATGCTCTTGTTTTAATTACAATGTACAATGTGTGGGATCTTATCGGAAGATACATTCCGCTGATTAAAATCCTGGATTTGGAGTCGAGAAAGTTGATCACTACCGCGTGCATTTCTCGATTCTTACTTATTCCTGCATTTTATTTCACTGCAAAATATGGTACTCAGGGTTGGATGATATTGTTGACATCTTTCTTGGGATTATCTAATGGTTACCTTACTGTTTGTGTTCTCACTGCTGCACCCAAAGGTTACAAGGGACCTGAACAAAATGCCTTGGGAAATCTGTTGGTATTGTTTCTTCTTGGAGGTATTTTTGCTGGGGTGACACTTGACTGGTTGTGGTTAATAGGCAAAGGATGGTGA 1233 0.4006 MVDGEPPPRLQGKFTATVVCWLLGNGVLFCWNSMLTIQDYYVSLFPNYHPARVLSLVYQPFAFGTLAILAYNEAKINTRQRNLFGFALFFFGVLAVLILDLATSGKGGIGTYIGICMVSGVFGIADANAQGGMIGDLSYMHPELLQSFLAGEAASGALTSALRLITKAAFDNSQDGLRKGAILFFSISTFFVLLCLVLYGFVFPKLPIVKYYRSKAASEGSKTVSSDLAAAGIHSETGESRQFERKENKELLMENIDYALNLFMIYLLTLSIFPGFLTEDTGKHSLGTWYALVLITMYNVWDLIGRYIPLIKILDLESRKLITTACISRFLLIPAFYFTAKYGTQGWMILLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01771 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 345 361 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi5g01771 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 104 124 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi5g01771 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 382 406 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi5g01771 410 Pfam Nucleoside transporter 122 404 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi5g01771 410 PIRSF ENT 9 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi5g01771 410 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 7 404 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01771 Vivi-Chr5 63881752 63884278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01771 3 408 Organic Solute Cotransporters AT4G05120 69.193 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01771 K15014 - gmx:100798899 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01771 5 63881752 63884278 Vivi5g01771 5 63881752 63884278 ECH
Vivi2g06874 2 208546135 208549902 Vivi5g01771 5 63881752 63884278 PCT