Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06874 ATGGTCGATACTGAGCCTCCATCGCGTCTTAAGGGAAAATATGTTGCTATAGTGGTTTGTTGGCTTCTTGGCAATGGATGTCTTTTCTCTTGGAATAGTATGCTCACAATAGAAGATTACTATATGGAATTGTTTCCGAAATATCATCCATCCAGGGTGTTTACACTTGTATACCAGCCATTTGCAGTTGGAACACTTTTTATACTTTCGTATAATGAAGCAAAAGTTAATACTAGATTAAGAAATCTGTTTGGATATTCTCTCTTTTTCATATCCACTCTATTGGTGTTAATATTGAATTTAGCAACTTCAGGTAAAGGAGGACTTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCATTTGGGGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGATTTGTCTTACATGCAATCCGAATTCATTCAGTCTTTTCTTGCTGGTTTGGCAGCATCTGGTGTATTAACATCTGGTTTAAGGTTAATCACAAAAGCAACATTTAACAATTCTAGGGGCGGTCTTAGAAAAGGAGCCATACTATTCTTTGCAATATCAACATTCTTTGAACTTTTGTGTGTCCTTCTCTACGCATTTGTTTTTCCTAAAATACCAATTGTGAAGTACTACCGTACAAAAGCAGTATCGGAAGGAAGCAAAACTGTTTTACAAGATCTTGCAGCAAGTGGCATCCAAACAATAGACAAAGAAGATGTGGATCATACAAAAGCACAAGAGAGGAAAGGAAACAAGCAATTGTTATTTGAAAACATTGATTATTTACTTGACATGTTTCTAATATATGCATTGACGCTATCTATTTTTCCTGGATTTCTTTTTGAAGATACTGGAGCACATAGTTTGGGAACGTGGTATGCACTTGTGTTAGTTGCAATGTATAATGTGTGGGATCTAATAGGAAGATACATTCCACTCTTAGAATTCCTGAAATTGGAGTCAAGAAAGTTGATCACAATAGTTATTCTATGTCGTTTTTTACTTGTTCCGGCATTTTATTTCACTGCAAAATATGGTGACCAAGGATGGATGATAATGTTGACATCATTCTTGGGGTTATCCAATGGTTACCTCACTGTTTGTGTTATGACATCTGCACCAAAGGGTTACAAGGGTCCAGAACAAAATGCATTGGGGAATCTGTTGGTGTTGTTTCTATTAGGTGGTATTTTTGCAGGGGTGACTTTAGACTGGTTGTGGTTGATAGGTAAAGGTTGGTAA 1245 0.3687 MVDTEPPSRLKGKYVAIVVCWLLGNGCLFSWNSMLTIEDYYMELFPKYHPSRVFTLVYQPFAVGTLFILSYNEAKVNTRLRNLFGYSLFFISTLLVLILNLATSGKGGLGTFIGICAISGAFGVADAHVQGGMVGDLSYMQSEFIQSFLAGLAASGVLTSGLRLITKATFNNSRGGLRKGAILFFAISTFFELLCVLLYAFVFPKIPIVKYYRTKAVSEGSKTVLQDLAASGIQTIDKEDVDHTKAQERKGNKQLLFENIDYLLDMFLIYALTLSIFPGFLFEDTGAHSLGTWYALVLVAMYNVWDLIGRYIPLLEFLKLESRKLITIVILCRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06874 414 Pfam Nucleoside transporter 123 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 6 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 SUPERFAMILY MFS general substrate transporter 15 407 IPR036259 -
Vivi2g06874 414 PIRSF ENT 3 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 150 170 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 349 365 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 122 144 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vivi2g06874 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 386 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06874 Vivi-Chr2 208546135 208549902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06874 3 412 Organic Solute Cotransporters AT4G05120 69.268 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06874 K15014 - gmx:100798899 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06874 2 208546135 208549902 Vivi2g06874 2 208546135 208549902 ECH
Vivi2g06874 2 208546135 208549902 Vivi5g01771 5 63881752 63884278 PCT