Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01735 ATGAGTCGCTACGATCCAAACCCTTTCGAAGAAGAAGAGACTCATGTCAATCCCTTTGCGGATGGGACAGCTAAAAAAGGATCTGGGCAATCAAGTTATGGTGGAGGGGCATTTTACACTACTAACCCTGGAAGTGTTCCTTCTGCGACCTCAAGGCTTTCACCCCTTCCTCCCGAGCCTTATGATCGTGGGGCAACTATTGACATCCCTCTTGATAGCTCAAAGGATGTCAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAACTGAAAAGAAGGGAACAGGAACTAAAAAGAAGAGAGGACGCCATATCACGAGCTGGTATTGTAATAGAGGAAAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGGAAATGAAATACCAATACATCTTCAGAGGATGCAGTATGTTGCATTTACAACATGGTTAGGTTTGGTTCTGTGTCTTTTGTGGAATATAGTGGCAGTTACCACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCTATTATATACTTTATATCTGGTGCTCCAGCATCCTATGTAATGTGGTATCGCCCCCTTTATCGTGCTATGAGGACAGACAGTGCTCTGAAGTTTGGATGGTTTTTTGTCTCTTACATGTTGCACATTGGCTTTTGCATTTTTGCTGCAGTTGCCCCACCCATTATCTTTAAAGGAAAATCTCTCACAGGTATTTTGGCTGCGATTGATGTGATAGGCGGCAGTGCTTTGGTTGGGATATTCTACTTTATTGGGTTCGCATTTTTCTGTATTGAGTCACTGATGAGCATCTGGGTTTTTCAGCAAGTATTGATGTACTTCCGTGGAAGTGGCAAGGCTGCAGAGCTGAAGCGAGATGCAGCCAGAGGAACGATGATGGCAGCCCTATGA 918 0.439 MSRYDPNPFEEEETHVNPFADGTAKKGSGQSSYGGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATIDIPLDSSKDVKAKEKELQAKEAELKRREQELKRREDAISRAGIVIEEKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPASYVMWYRPLYRAMRTDSALKFGWFFVSYMLHIGFCIFAAVAPPIIFKGKSLTGILAAIDVIGGSALVGIFYFIGFAFFCIESLMSIWVFQQVLMYFRGSGKAAELKRDAARGTMMAAL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01735 305 MobiDBLite consensus disorder prediction 1 69 - -
Vivi5g01735 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 302 IPR007273 GO:0015031|GO:0016020
Vivi5g01735 305 Pfam SCAMP family 114 285 IPR007273 GO:0015031|GO:0016020
Vivi5g01735 305 Coils Coil 74 104 - -
Vivi5g01735 305 MobiDBLite consensus disorder prediction 1 19 - -
Vivi5g01735 305 MobiDBLite consensus disorder prediction 24 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01735 Vivi-Chr5 61762235 61777585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01735 2 281 Miscellaneous Gene Families AT1G61250 69.014 8.00e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01735 K19995 - gmx:100796729 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06907 2 209238601 209243140 Vivi5g01735 5 61762235 61777585 PCT