Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06907 ATGACTACCTTCGAAACCAATCCCTTCGCCGAAGATGAGGTGAATCCTTTTGCTGATGGAGGTGCTAAAGGAAAAGCTTCAGGGCAACCAAACTATGGTGGTGGGGCATTCTACACTACTAACCCAGGAAGTGTTTCCCCTGCAACCTCGACAAAGCTCACACCCCTTCCTCATGAACCTCATGATCGTGGGGCAACTGTTGACATTCCTCTTGATATGCCAAAGGAACTCAAAGCAAGGGAAAAAGAACTTCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAAAGAAAGGAAGATGCTATATCACGAGCTGGAATAGTCATAGAGGAAAAAAATTGGCCACCTTTTTTCCCTCTCATTCATCATGACATCGCAGCTGAAATACCAATTCATCTTCAGACAATCCAGTATTTTGCATTTGCAACATGGTTGGGTTTGATTTTATGTCTTACTTTTAATATTGCTGCTGTTACAGTAGCTTGGCTCAAAGGAGAAGGTCTATCAATATGGTTTCTTGCTATCATATACTTTATCTCCGGTGTTCCAGGATCCTATGTGATGTGGTATCGCCCTCTTTATCGTGCTACAAGAACGGACAGTGCTCTAAAGTTTGGCTGGTTTTTCTTGTGTTACTCGTTCCACATTATGTTTTGTGTTCTGGCTGCAGTTGCACCTCCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTCTGCCTGCAATTGAGGTGCTGACCTACAATCCAGTGGTTGGGATACTCTACTTAGTTGGGTTTGCTTTTTTCGCCGTTGAATCACTACTAAGCATATGGGTTATTCAGCAAGTATACATGTACTTTCGCGGCAGTGGGAAAGCTGCACAGATGAAACGGGAGGCTGCAAGGGGGGCCATGATGACAGCTCTATGA 918 0.4368 MTTFETNPFAEDEVNPFADGGAKGKASGQPNYGGGAFYTTNPGSVSPATSTKLTPLPHEPHDRGATVDIPLDMPKELKAREKELQAREAELKRREQELKRKEDAISRAGIVIEEKNWPPFFPLIHHDIAAEIPIHLQTIQYFAFATWLGLILCLTFNIAAVTVAWLKGEGLSIWFLAIIYFISGVPGSYVMWYRPLYRATRTDSALKFGWFFLCYSFHIMFCVLAAVAPPIIFKGKSLTGILPAIEVLTYNPVVGILYLVGFAFFAVESLLSIWVIQQVYMYFRGSGKAAQMKREAARGAMMTAL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06907 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 6 302 IPR007273 GO:0015031|GO:0016020
Vivi2g06907 305 MobiDBLite consensus disorder prediction 1 68 - -
Vivi2g06907 305 Coils Coil 77 104 - -
Vivi2g06907 305 Pfam SCAMP family 114 285 IPR007273 GO:0015031|GO:0016020
Vivi2g06907 305 MobiDBLite consensus disorder prediction 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06907 Vivi-Chr2 209238601 209243140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06907 67 305 Miscellaneous Gene Families AT2G20840 78.661 2.09e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06907 K19995 - qsa:O6P43_000680 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06907 2 209238601 209243140 Vivi5g01735 5 61762235 61777585 PCT