Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01542 ATGGTGAAAATGGTAGGGACAATCATATGTACACTTTTCATGACTTTGCTATTTGCTGTTTCGGCATTTGCTAATTTTCATCATTCCAGGTCACCAGAAGTTTTCTTCCAAAATGGGAACTTTGAGGAGAAGCCAAACCCAAGAAACCTAAAGAAAACAAGACTGATAGGGACACATGCACTTCCCAAATGGGAAATCAATGGTCTAGTTGAGTACATCTCTGGAGGACCACAACCAGGAGGAATGTACTTCCCAGTGACACATGGAGTTCATGCAGTTAGGCTTGGAAATGAAGCCTCCATCTCCCAAACCATTAAAGTCAAACCTGGTCAATGGTATGCTCTGATATTAGGAGCCACGAGGACATGTGCTCAAGATGAAGTCTTGAGAATCTCAGTACCTTCACAATCTGGTGATGTTCCTTTGCAAACACTCTATAGCCTCAACGGTGATGTTATTGCTTGGGGATTCAAGGCTAGTTCTTCTACTGCAAAAGTTACTTTCCATAACCCTGGTGTTCAAGAAGATCCTACTTGTGGTCCACTTTTGGATGCTGTTGCTATTAGAGAGTTCTACCCTCCAATGCCTACACGCGCTAATTTGGTGAAAAACCCTGGCTTTGAGGAGGGTCCATTTCCGATTTTCAACTCAACCAATGGTGTTCTTCTCCCTCCAAAACAACAAGATCTTGTGTCACCACTCCCCGGTTGGATTATTGAATCCCTCAAAGCAATTAAGTTCATTGATTCAAACTATTTCCAAGTACCGTTTGGACACGGAGCAGTTGAGCTTGTTGCAGGAAAGGAAAGTGCCATTGCGCAAATTCTAAGAACAGTTCCAAACAAAGTCTACAACATGAAATTCACAATTGGTGATGGAAGAAATGGTTGTCATGGATCAATGATGGTTGAAGCTTTTGCTGCAAAAGATACTCTTAAAGTTCCTTTCAAATCTGTAGGAAAGGGAACATTCAAGACCGCAAGTTTCAACTTCAAAGCAGTTTCAGACAGAACCAGAATCACATTCTATAGCGCTTTCTATCATACAAGGATCGATGATTTTGGATCTCTTTGTGGCCCGGTTCTTGATCAAGTTATAGTATCCCCTGTTGCCTAA 1116 0.4185 MVKMVGTIICTLFMTLLFAVSAFANFHHSRSPEVFFQNGNFEEKPNPRNLKKTRLIGTHALPKWEINGLVEYISGGPQPGGMYFPVTHGVHAVRLGNEASISQTIKVKPGQWYALILGATRTCAQDEVLRISVPSQSGDVPLQTLYSLNGDVIAWGFKASSSTAKVTFHNPGVQEDPTCGPLLDAVAIREFYPPMPTRANLVKNPGFEEGPFPIFNSTNGVLLPPKQQDLVSPLPGWIIESLKAIKFIDSNYFQVPFGHGAVELVAGKESAIAQILRTVPNKVYNMKFTIGDGRNGCHGSMMVEAFAAKDTLKVPFKSVGKGTFKTASFNFKAVSDRTRITFYSAFYHTRIDDFGSLCGPVLDQVIVSPVA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01542 371 FunFam DUF642 family protein 196 367 - -
Vivi5g01542 371 Gene3D - 195 355 - -
Vivi5g01542 371 Pfam Protein of unknown function (DUF642) 36 189 IPR006946 -
Vivi5g01542 371 Pfam Protein of unknown function (DUF642) 200 367 IPR006946 -
Vivi5g01542 371 PANTHER OS02G0527500 PROTEIN-RELATED 16 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01542 Vivi-Chr5 48437834 48439940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01542 - - cam:101488216 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g06717 3 189389185 189391993 Vivi5g01542 5 48437834 48439940 ECH
Vivi5g01542 5 48437834 48439940 Vivi5g01542 5 48437834 48439940 ECH