Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06717 ATGGCGGTGCCTCTTTCTATAGTTTGTCTGGCTTTCCTCTTTGTTGCTTCAGCTTTTGCTTCTCTTCAGCCTAGAATACCAGAAGTTTATCTTCAAAATGGAAACTTCGAGGAGAAGCCAAACCCTAAAGATCTCTTAAAAACAAAGCTCGTCGGAAAATATTCGCTACCGAAATGGGAAATCAACGGTTTGGTTGAGTATGTATCCGGAGGTCCACAACCAGGAGGAATGTATTTCCCAGTGACTCATGGAACACATGCTGTAAGACTAGGAAACGAAGCCTCAATTTCTCAAACAATCAAAGTCAGACCCGGTCAACGCTACGCTTTAATTCTCGGCGCATCGAGGACTTGTGCACAAGACGAAGTTTTGAGAATCTCTGTGCCTCCACAAACCGGCGATGTTCCTTTGCAAACGTTGTATAGTCTCAATGGTGATGTTATTGCTTGGGGATTTAAGGCTACTTCTAATGTTGCTAAAGTGACTTTTCATAATCCTGGTGTTCAAGAAGATGCTGCTTGTGGTCCTCTTCTTGATGCTATTGCTATCAGAGAGTTTTATCCTCCAATGCCAACCAGAGTTAATTTGGTGAAAAATCCTAGCTTCGAGGAGGGTCCATTCCCGATTTTCAACTCAACCAACGGCGTCCTCCTCCCACCACAACAACAGGATCTCTTCTCACCGCTCCCCGGTTGGATCGTCGAGTCACTCAAAGCCGTGAAATTCATCGACGCAAACCACTTCAACGTCCCATTCGGACTAGGAGCAGTCGAGCTCGTCGCCGGCCGAGAAAGCGCGATTGCACAAATCATCCGAACAGTTACCAACAAAGTCTACAAGATCACATTCTCGGTCGGAGACGCGAAAAACGGCTGCCACGGATCAATGCTGGTTGAAGCATTTGCTGCAAAGGACACTTTTAAAGTTCCTTTTAAATCTGAAGGGAAGGGGAAATTCATAACTGTGAGTTTCAAGTTCAAGGCTGTTGCACCAAGGACTAGACTCACATTCTATAGCTCTTTCTATCATACTAGAATTGATGATTTTGGTTCTCTTTGTGGTCCTGTTCTTGATCAGGTTATTGTCTCCCCTTTGGCCTAA 1101 0.4496 MAVPLSIVCLAFLFVASAFASLQPRIPEVYLQNGNFEEKPNPKDLLKTKLVGKYSLPKWEINGLVEYVSGGPQPGGMYFPVTHGTHAVRLGNEASISQTIKVRPGQRYALILGASRTCAQDEVLRISVPPQTGDVPLQTLYSLNGDVIAWGFKATSNVAKVTFHNPGVQEDAACGPLLDAIAIREFYPPMPTRVNLVKNPSFEEGPFPIFNSTNGVLLPPQQQDLFSPLPGWIVESLKAVKFIDANHFNVPFGLGAVELVAGRESAIAQIIRTVTNKVYKITFSVGDAKNGCHGSMLVEAFAAKDTFKVPFKSEGKGKFITVSFKFKAVAPRTRLTFYSSFYHTRIDDFGSLCGPVLDQVIVSPLA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06717 366 PANTHER OS02G0527500 PROTEIN-RELATED 13 362 - -
Vivi3g06717 366 Gene3D - 190 350 - -
Vivi3g06717 366 FunFam DUF642 family protein 191 362 - -
Vivi3g06717 366 Pfam Protein of unknown function (DUF642) 195 362 IPR006946 -
Vivi3g06717 366 Pfam Protein of unknown function (DUF642) 30 184 IPR006946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06717 Vivi-Chr3 189389185 189391993 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06717 - - gmx:100804119 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g06717 3 189389185 189391993 Vivi5g01542 5 48437834 48439940 ECH
Vivi3g06717 3 189389185 189391993 Vivi3g06717 3 189389185 189391993 ECH