Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00925 ATGGAAACTCCTGATAATGTGGTAATGAACCGGATCGAACCGGGTTCAAAGGAGAACGGTTTGAGAGCAGAGATCGATACTTCGGCGCCGTTTGAGTCTGTGAAAGAAGCTGTTTCGAGATTCGGTGGTGTTGGTTACTGGAAACCTACTAACAATGTTAACCTCATTGCTCCTCAGCAGCAAGACACAAGTGAACTTGATGCTGAAAAATTGGAGGAACAAACAGTGGGATTGGAGAAAGAGCTTATACTCAAAGAGAGGGAAACACTTGATGTCTTGAAAGAATTGGAAAGTACAAAAAAGCTTGTTGAAAATTTGAAATCAAAGCTTCATGCAGAAGAATCTGAAACAAATTTGAACATTAAGATGAATTTATGCGACAAAAAGGAGAATGAGAAAGAAGAAGAAAAGGAAAATCAAGTGAGTCGGGTTTCTTACAATTCAACATCGCCCGGTTTAATATTAAAGGAATTGAAGCAGGCGAAATTGAATCTAAACCGATCCACAAACGATATAGCTGATGTTCGAGTTTCTGTTGAGTCGCTCAACAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACTTGCGCGAGGCTAACTCAGAATTCTTCGAAAATAACTTATCTAGAGGAAGAGCTAAACCAAACAAGACTTAAGCTGCAAGTAGTGAAAGAGGCTGAAATTGAATGTGGTTCGGATGAACCTTCTGATGTTACGAAAGAGCTTCAACGGTTGAGTTCCGAGGCAGAACGTTTCAAGAAAATGGGAGAGGCTGCGAAATCGGAAGTCATGAGAGCAATGTCTGAGATTGAACAAACAAAAGCCATGATAAGAACATCTGAGATAAGGTTGGTTGCTGCTCGGAAAATGAAGGAAGCTGCTAAAGCGGCCGAAGCTGCTGCAATGGCCGAGATAAAAGTGTTATCTTATCACGATGGAGATTGTATGCTAAAGCGCAACGGAGTTGACGGAGTTACTCTAACCTTTGAGGAGTATAATGCTTTAACATGCAAAGCTCGGGACGCCGAGGAACAATCTAAGAAGAGAGTTCTTGATGCAATGGCTCAAGTTGATGAAGCAAATTTATCGAAAATGGATGTTTTAAAGAGAGTTGAGGAAGCTACATTGGAAGTTAAAACAAGCAAAGTGGCTCTTGAAGAAGCTTTGGAGAGAGTAGAGGCTGCAACTCGAGGAAAGTTAGTAGTCGAAGAAGCGTTAAGAAACTGGCGATCAGAGGGTCAAAAAAGGCGATCATCGATACATAACAATATGAAGTTCAAAAACCCTTCTCATATTCATAGACACACTCGGTTATTCGATGTATATGCGATGAATCAGGTTGACGATGAAGCCAAAGAACCGGTGCTTAAGCCGACTCTATCGATAGGACAAATATTGAGCCGGAAACTGATGAAGCCGGGAGAGTTTGAAGGTGGGATGATACGAGAAAAAGGTTCGATGAAACGGAAAGTGTCGTTGGGTCAGATGCTTGGTAAACAGAACTATGATCCATCATGTTTTGAATATGATAAGCAAGTTGAGAAAGAAAATGGACAGAAGCAGTTTTCTGCTAAGAGGAAGAAATTTGGATTTGGTAGATTTTCTCTTCATTTGACAAAACAACAAAAGAAGAAAAAACCAACTTTGAACTTGAGGTGA 1662 0.4049 METPDNVVMNRIEPGSKENGLRAEIDTSAPFESVKEAVSRFGGVGYWKPTNNVNLIAPQQQDTSELDAEKLEEQTVGLEKELILKERETLDVLKELESTKKLVENLKSKLHAEESETNLNIKMNLCDKKENEKEEEKENQVSRVSYNSTSPGLILKELKQAKLNLNRSTNDIADVRVSVESLNKKLEKERISLEKTCARLTQNSSKITYLEEELNQTRLKLQVVKEAEIECGSDEPSDVTKELQRLSSEAERFKKMGEAAKSEVMRAMSEIEQTKAMIRTSEIRLVAARKMKEAAKAAEAAAMAEIKVLSYHDGDCMLKRNGVDGVTLTFEEYNALTCKARDAEEQSKKRVLDAMAQVDEANLSKMDVLKRVEEATLEVKTSKVALEEALERVEAATRGKLVVEEALRNWRSEGQKRRSSIHNNMKFKNPSHIHRHTRLFDVYAMNQVDDEAKEPVLKPTLSIGQILSRKLMKPGEFEGGMIREKGSMKRKVSLGQMLGKQNYDPSCFEYDKQVEKENGQKQFSAKRKKFGFGRFSLHLTKQQKKKKPTLNLR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00925 553 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 23 118 - -
Vivi5g00925 553 Coils Coil 93 139 - -
Vivi5g00925 553 Coils Coil 176 203 - -
Vivi5g00925 553 Coils Coil 61 88 - -
Vivi5g00925 553 Pfam Weak chloroplast movement under blue light 114 417 IPR008545 -
Vivi5g00925 553 Pfam Weak chloroplast movement under blue light 23 116 IPR008545 -
Vivi5g00925 553 Coils Coil 372 392 - -
Vivi5g00925 553 Coils Coil 207 227 - -
Vivi5g00925 553 Coils Coil 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00925 Vivi-Chr5 19979282 19982022 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00925 - - psat:127105716 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02390 6 104665980 104671492 Vivi5g00925 5 19979282 19982022 PCT