Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00344 ATGGATGAATCCAACAACAATACAAGAGAGTTTCAACTTCAATCTTCTTCATCATCATTATCATCATCGAGATCGATTCAACAACAGTATTCTCCTTCATCTCGAAGACGAGAAATCAAAGGTATTAGTAGTAATGCGCGGTTTTCTTGGATTGCAAGCAACCGGTTAGTATTATGGCTAATTTTGATTACCCTTTGGGCTTATCTTGGATTTTTTGCTCAATCTAAGTGGGATGATTATGATAAACAACATGAAATTAAAGGGTTTGATTTTCATCATAGTAATCATCAAGATTTGGTTATCAAAAAGAGTTCTTTATTTGATCATAATGAAAAAGTTGTTGTTTTGGCCAAGAAAGAAGAAAATGGTAAAACTAAAAGTACTTCAAAGAAAAAGAAAAGTAGAAGATCTTTGAGAAGTGAGGTTAATGATAAGCAGAAAAGAAGATTGAAAGTTGAAAAGGAGTTAGAGAAGTTTCCTCTTGTGGGTCCATTTGGGTTATTAGAGGATAGGATATTGAAATTGAGTAGTACTAATAATGAGAAGTTTTGTGGAAAATGTGAAAGGAAAAGTGATTTTGCAAAAGCTGTTTTGTCAAGGAGATTTGTGTTGATATTTCACGAGCTTTCGATGACTGGTGCACCGCTTTCGATGATGGAATTGGCAACCGAATTGATGAGATGCGAAGCGAGTGTTTTAGCTGTTGTTCTTAGTAAAAAAGGTGGTTTGATGGAAGAGCTTATTAGGAGAAAAATTAAGGTGGTTGATGATAAAGTTGCTCATAGCTTCAAAGCTGGAATGAATGCTGATCTTGTCATTGCTGGATCAGCTGTTTGTTCTTCATGGATTGAACAGTATATTGAATATTTTCCTGCTGCTGCAAATCATATTGTTTGGTGGATTATGGAAAATCGACGAGAGTATTTCGATCGATCATACCACGTCTTGAACAAAGTGAAGATGTTGGTTTTTCTTTCCGAATCACAATCCAAGAAATGGCGAAAATGGTGCGAAGAAGAAAGCATAAGGCTCAGATTCCACCCTGCAGTTGTTCCACTGTCTGTTAACGACAAACTTGCTTTCGCAGCCGGAATTCATTCCTCGAGCGCTTCCGCGAAAATCGATGAGAAGAGGAAGCTCTTGCGCGAATCGGTCCGAAGAGAAATAGGTTTGACCGATAACGATATGCTTGTGATATCTCTAAGTAGCATCAATCCTGGAAAGGGTCAGCTACTGTTTCTCGAATCAGCAAACAAAATAGTCGAAAATGAATCATCGCAAAATTCATCGGAAGTTACTTGGAATAGAAGGCATCATATTAGAAAATTGTTACCAACGTCGAAAAATAGAAAAACGAAACAATCTCTGAAAATTGTATTTGGTTCTGTTGGATCAAAGAGTAACAAGTTGCAATATGTTATGAGTATCGCAAGTTTCTTGTCGCAACATTCGAATCTATCGAAGAATGTTTTGTGGACTCCAGCTACTACGCATGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTCATAAACTCTCAGGGATTAGGAGAAACCTTCGGACGCGTGACGGTAGAAGCAATGGCATTTGGTCTTCCGGTGTTGGGAACAAATGCTGGAGGGACAAAGGAGATTGTGGAGCATGGTGTGAATGGTCTTCATCATCCTATTGGACGTAAAGGGAATCATGTTCTTGCAGAAAATCTAAGGTTTTTACTTGAAAATCGATTTGCAAGAGAGAAAATGGGAATGAATGGAAGAAAGAAAGTGCAAAGAATGTATATGAAGGAACATATGTATAGAAAATTTATAGAGGTTCTTGTTAGGTGCATGAGAAGTAAATAA 1845 0.374 MDESNNNTREFQLQSSSSSLSSSRSIQQQYSPSSRRREIKGISSNARFSWIASNRLVLWLILITLWAYLGFFAQSKWDDYDKQHEIKGFDFHHSNHQDLVIKKSSLFDHNEKVVVLAKKEENGKTKSTSKKKKSRRSLRSEVNDKQKRRLKVEKELEKFPLVGPFGLLEDRILKLSSTNNEKFCGKCERKSDFAKAVLSRRFVLIFHELSMTGAPLSMMELATELMRCEASVLAVVLSKKGGLMEELIRRKIKVVDDKVAHSFKAGMNADLVIAGSAVCSSWIEQYIEYFPAAANHIVWWIMENRREYFDRSYHVLNKVKMLVFLSESQSKKWRKWCEEESIRLRFHPAVVPLSVNDKLAFAAGIHSSSASAKIDEKRKLLRESVRREIGLTDNDMLVISLSSINPGKGQLLFLESANKIVENESSQNSSEVTWNRRHHIRKLLPTSKNRKTKQSLKIVFGSVGSKSNKLQYVMSIASFLSQHSNLSKNVLWTPATTHVASLYSAADVYVINSQGLGETFGRVTVEAMAFGLPVLGTNAGGTKEIVEHGVNGLHHPIGRKGNHVLAENLRFLLENRFAREKMGMNGRKKVQRMYMKEHMYRKFIEVLVRCMRSK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00344 614 Pfam Glycosyl-transferase family 4 199 367 IPR041693 -
Vivi5g00344 614 PANTHER BNAA05G14870D PROTEIN 12 430 - -
Vivi5g00344 614 Pfam Glycosyl transferases group 1 480 588 IPR001296 GO:0016757
Vivi5g00344 614 Coils Coil 135 155 - -
Vivi5g00344 614 Gene3D Glycogen Phosphorylase B; 369 594 - -
Vivi5g00344 614 MobiDBLite consensus disorder prediction 1 36 - -
Vivi5g00344 614 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 208 607 - -
Vivi5g00344 614 CDD GT4_PimA-like 196 607 - -
Vivi5g00344 614 MobiDBLite consensus disorder prediction 118 146 - -
Vivi5g00344 614 MobiDBLite consensus disorder prediction 7 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00344 Vivi-Chr5 4651466 4653986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00344 9 612 Glycosyltransferase AT1G52420 51.351 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00344 - - cam:101493983 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00344 5 4651466 4653986 Vivi5g00344 5 4651466 4653986 ECH
Vivi2g07857 2 227379605 227383597 Vivi5g00344 5 4651466 4653986 PCT