Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07857 ATGATTGTTGAGGAAAGTAGTAATAGAGGTGAATTTCAGTCTGGTTTAGCTAAACTATCTTCATTAAGATCAGCTGGTACTGGTACTTTTAAATCAACATTATCTGGAAGATCGACTCCAAGAAGTAATTCTCCTTCGTTTCGAAGATTGAATTCGAGTAGAACACCGAGGAAGGACGGAAGGGGTTTTGGTGGTTCGGTGTTGTTTCGGAGCAATCGCGTGTTGTTGTGGTTGCTTTTGATTACTCTATGGGCTTATCTTGGGTTTTTTGTTCAGTCTAGGTGGGCTCATAGTGATAAGAAAGAGGAGTTTTCTGGATTTGGGACGGGGCCGAGGAATACGGGCGCAGACGCTGATCCGACGAGTGTTCGACGCGATTTAATTGCTAGTGATGAGTCTTTGTCTGTTAATAATGGTACAGATACAAATAAAGGTGGGATTGGTAGAACAATAAATGTGGCTTTGGCTTTGGCTAAGAAAGAAAATGATGATAATGATGATGGTTCGTCTCGTCGTAAAGCGAGTTCGAAGAAAAAGAGCAGGCGATCTTCGAAAGGTAAAGCCCGTGGTAAGAAAAAACCGACAGTGGAAATTAAGAACAACACTATAGAGGAGCAGGAACCGGAAATTCCCCAGACCAATAGTACATATGGATTGCTTGTTGGTCCGTTTGGTTCGATAGAGGATAGGATTTTGGAATGGAGTCCTCAGAAACGTTCCGGGACATGTAATAGGAAGGGGGACTTTGCGCGGCTTGTTTGGTCCAGAAGATTTATCTTGGTGTTCCACGAGCTTTCCATGACTGGAGCTCCGCTTTCAATGATGGAGTTGGCAACGGAGCTTTTGAGCTGTGGAGCCACTGTTTCAGCTGTTGCACTTAGCAGGAAGGGTGGTTTGCTGTCTGAGCTTTCTAGAAGGCGGATCAAGGTGCTGGAGGACAAAGCAGAGCTCAGCTTTAAAACTGCAATGAAAGCTGATCTCGTAATTGCTGGTTCAGCTGTATGTGCATCATGGATTGAAAAATATATTGAACGTTTTCCTGCGGGAGGGAGTCAAGTTGCTTGGTGGGTTATGGAAAACCGTCGAGAGTACTTCGATCGTTCAAAGGGTGTCTTGCACAGAGTAAAAATGTTGGTTTTTCTTTCTGATTCACAATCTAAACAATGGCTAAAATGGTGTGAAGAAGAAAACATAAAACTGAGATCTCAACCCGAAATTGTGCCTTTGTCTGTTAATGATGAACTAGCATTTGTAGCTGGCATCCCCTCTACACTTAACACTCCATCCTTTAGTACCGATAAAATGATTGAGAAAAAACAGTTATTGCGAGAATCAGTCCGAAAAGAAATGGGATTGACCGATAATGATATGCTTGTGATATCTCTGAGTAGCATCAACCCCGGAAAAGGCCAGCTGTTGCTTCTTGAATCAGCAAGCTCAGTAGTAGAACATATACAGTTGGAAGATGGTAAGAAAATGAAAAAATTATCAAATATAAAGGAAGGCTTGTCTACTCAGGCAAGAAGACATCGTGTTAGAAAACTGTTACCATTGTTGAAGAAAGGCAAAGTAGCTTCGAATGATATCTCAAGCACTTCTATAAGCAGGAAACAATCTCTTAAAGTTCTCATTGGTTCTGTTGGATCTAAAAGTAACAAGGGGGATTATGTTAAAAGCCTTCTAAGTTTCTTAGAACAGCATCCCAACACTTCAAAATCAGTTTTGTGGACTCCATCCACAACACAGGTTGCTTCACTATACTCTGCGGCAGATGTTTATGTCATAAACTCTCAGGGACTTGGAGAGACATTCGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACTGATGCGGGTGGAACGAAAGAGATAGTAGAACACAATGTTACAGGTCTTGTTCATCCAATTGGACGGGCAGCAGGGAACGATGTCCTTGCACAGAATCTTCGATATTTGCTGAAAAACCAGTTGGCAAGGAAACAAATGGGAATGGAAGGTAGAAAGAAGGTGGAGAAGATGTATTTGAAGCAACACATGTATAAGAAATTTGTTGATGTTATTGTTAGATGCATGAGAAGCAAATAA 2100 0.419 MIVEESSNRGEFQSGLAKLSSLRSAGTGTFKSTLSGRSTPRSNSPSFRRLNSSRTPRKDGRGFGGSVLFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTGADADPTSVRRDLIASDESLSVNNGTDTNKGGIGRTINVALALAKKENDDNDDGSSRRKASSKKKSRRSSKGKARGKKKPTVEIKNNTIEEQEPEIPQTNSTYGLLVGPFGSIEDRILEWSPQKRSGTCNRKGDFARLVWSRRFILVFHELSMTGAPLSMMELATELLSCGATVSAVALSRKGGLLSELSRRRIKVLEDKAELSFKTAMKADLVIAGSAVCASWIEKYIERFPAGGSQVAWWVMENRREYFDRSKGVLHRVKMLVFLSDSQSKQWLKWCEEENIKLRSQPEIVPLSVNDELAFVAGIPSTLNTPSFSTDKMIEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESASSVVEHIQLEDGKKMKKLSNIKEGLSTQARRHRVRKLLPLLKKGKVASNDISSTSISRKQSLKVLIGSVGSKSNKGDYVKSLLSFLEQHPNTSKSVLWTPSTTQVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVEHNVTGLVHPIGRAAGNDVLAQNLRYLLKNQLARKQMGMEGRKKVEKMYLKQHMYKKFVDVIVRCMRSK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07857 699 MobiDBLite consensus disorder prediction 28 51 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 190 204 - -
Vivi2g07857 699 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 262 694 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 161 211 - -
Vivi2g07857 699 PANTHER BNAA05G14870D PROTEIN 4 699 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 127 147 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 28 62 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 174 189 - -
Vivi2g07857 699 Pfam Glycosyl transferases group 1 542 673 IPR001296 GO:0016757
Vivi2g07857 699 Gene3D Glycogen Phosphorylase B; 430 679 - -
Vivi2g07857 699 Pfam Glycosyl-transferase family 4 254 423 IPR041693 -
Vivi2g07857 699 CDD GT4_PimA-like 259 692 - -
Vivi2g07857 699 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07857 Vivi-Chr2 227379605 227383597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07857 28 697 Glycosyltransferase AT3G15940 61.994 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07857 - - mtr:25487935 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07857 2 227379605 227383597 Vivi2g07857 2 227379605 227383597 ECH
Vivi2g07857 2 227379605 227383597 Vivi5g00344 5 4651466 4653986 PCT