Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00281 ATGGGAGTCGCTCGCTGTCAAACACAATGCTTGTCCTACCAAAGTTTGACGTTGCTTCACATTGGAATGAGTCAAGATATAGACTACTTCATTCCATATATGGATGGCTTTGTCAAAGTCGTCAAAACTTTACCAAAGAAGGGACAGTTGTCTCCGTTGTCTTGTCTCACAGGCACACACACAAACATATCAATGGAAGTAATCACTGAAGGAGTGAACAGCATCAATATCTCTGATTCTACTAAGAATCGTATTCATGTCTCCAATTCCAAAAAACCCATCTTCTTCTTCGTTAATCTGGCCAAGAATTACTTGAAGCAGTATAATGAGGTTGAGCTTTCAGCACTAGGATCGGCTATTGCCTCAGTGGTTTCCATTGCAGAAATTTTGAAACACAATGGACTTGCTGTGGAAAAGAAAATCAGAACATCAACAGTTGTCTTAGGTAATCCCAGAGGTAGAGCTGTGCAAAAGGCCAGGATTGAAATATTACTCGAGAAGACTGCAAACTTTGACGAGTTGATGGCGGCTGCTGAAGCAGCTGGTGAAAATGGAGATATTGAAGTGCATGCCGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAATGAAGAGCAGGCTGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAAGGAAGAGCACGCCGCGGCAGCTGCTGAAAAGGGTAAAAATGGACATAATGAAGAGCAGGCTGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAAGGAAGAGCACGCCGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAATGAAGAGCAGGCTGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAATGAAGAGCAGGCCGCGGCAGCTGCTGAAAAGGGTAAAAATGGAGATAATGAAGAGCGTGCTGCATGA 915 0.4448 MGVARCQTQCLSYQSLTLLHIGMSQDIDYFIPYMDGFVKVVKTLPKKGQLSPLSCLTGTHTNISMEVITEGVNSINISDSTKNRIHVSNSKKPIFFFVNLAKNYLKQYNEVELSALGSAIASVVSIAEILKHNGLAVEKKIRTSTVVLGNPRGRAVQKARIEILLEKTANFDELMAAAEAAGENGDIEVHAAAAAEKGKNGDNEEQAAAAAEKGKNGDKEEHAAAAAEKGKNGHNEEQAAAAAEKGKNGDKEEHAAAAAEKGKNGDNEEQAAAAAEKGKNGDNEEQAAAAAEKGKNGDNEERAA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00281 304 FunFam Uncharacterized protein At2g34160 81 197 - -
Vivi5g00281 304 SUPERFAMILY AlbA-like 82 176 IPR036882 GO:0003676
Vivi5g00281 304 Pfam Alba 83 143 IPR002775 GO:0003676
Vivi5g00281 304 Gene3D - 81 191 IPR036882 GO:0003676
Vivi5g00281 304 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 65 181 IPR014560 -
Vivi5g00281 304 MobiDBLite consensus disorder prediction 195 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00281 Vivi-Chr5 3610513 3614873 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00281 - - vvo:131601173 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00281 5 3610513 3614873 Vivi5g00281 5 3610513 3614873 ECH
Vivi2g07680 2 224344544 224345937 Vivi5g00281 5 3610513 3614873 PCT