Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07680 ATGGAAGTCATAACTGAAGGAGTAAACAACATCAACATTAATAACTCCGAATCTTACAAGAAGAATCGCATTCAAGTTTCTAACACCAAAAAACCCCTCTTTTTCTATGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTGGAACTCTCAGCACTAGGAATGGCTATTGCTACTGTTGTAACTGTTGCTGAGATTTTGAAAAATAACGGGCTTGCAGTCGAAAAGAAAATCATGACATCAACTGTTGATATAAAGGATGATTCTAGAGGTAGACCTGTGCAAAAGGCCAAGATCGAAATAGTACTTGGAAAGACAGAAAATTTTGATGAGCTGATGGCAGCTGCGGCTGCTGAAGATGGTGAAAATGGAGATGCGGAAGAACAGAATGCTTAA 402 0.393 MEVITEGVNNININNSESYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAAEDGENGDAEEQNA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07680 133 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 124 IPR014560 -
Vivi2g07680 133 FunFam Uncharacterized protein At2g34160 20 132 - -
Vivi2g07680 133 SUPERFAMILY AlbA-like 21 116 IPR036882 GO:0003676
Vivi2g07680 133 Gene3D - 20 132 IPR036882 GO:0003676
Vivi2g07680 133 Pfam Alba 22 77 IPR002775 GO:0003676
Vivi2g07680 133 PIRSF UCP030333_Alba 1 133 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07680 Vivi-Chr2 224344544 224345937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07680 - - gmx:100527358 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07680 2 224344544 224345937 Vivi2g07680 2 224344544 224345937 ECH
Vivi2g07680 2 224344544 224345937 Vivi5g00281 5 3610513 3614873 PCT