Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g06005 ATGGAGAGCGAAAAGAAATCGTCTTCAATATCAAACTTTGGAGCATGGGGTATGAACGTTGTGAGCTCCGTTGGAATTATCATGGCTAATAAACAGCTCATGTCCAATAATGGTTATGCTTTCACCTTCGCCACTACATTGACCGGCTTCCACTTCGCCGTAACTGCTCTCGTCGGTCTTGTTTCAAATGCTACCGGTTATTCTGCTTCAAAGCATGTTCCTCTTTGGGAGCTTATTTGGTTCTCTGCTATTGCCAATATATCTATCACTGGGATGAACCTCAGCCTCATGCTCAATTCTGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCGGTGGTTTGTGTCATGGAATGGATCCTTCACGGTAAACACTACTCAAGAGAAGTGAAAACTGCAGTCATGGTTGTGGTTATTGGTGTGGGCGTTTGCACTGTAACTGATGTAAAAGTTAACCTCAAAGGTTTCGTGTGTGCCTGTCTAGCTGTTGTATCATCATCTTTACAGCAAATTTCAATTGGATCTCTACAAAAGAAATATTCAATTGGATCTTTTGAACTGCTAAGTAAGACTGCTCCTATTCAAGCCCTCTCTCTTATTATTCTTGGTCCATTTATTGATTACTATCTCAGTGGCAAGTTGATAACCAACTTTAAGATGTCTTCTGGTGCCATTATATTCATTCTTCTTTCATGCACCCTAGCTGTGTTTTGCAATATAAGCCAGTACCTCTGCATTGGGCGCTTCTCAGCAGTTTCCTTCCAGGTTTTAGGCCACATGAAAACAGTATGTGTTCTGACTTTGGGGTGGCTACTATTCGATTCAGAGCTAACTTTGAAGAACATCATGGGAATGATTCTTGCAGTTGTTGGGATGGTAATTTATAGTTGGGCTGTGGAGCTTGAAAAGTCCTCAAATGTAAAGACTCTTCCTCATGCAAAAAACAGCCTAACAGAAGAAGAAATTAGACTATTGAGGGAAGGGATAGATAACAGTCCGTTGAAAGATGTTGAACTTGGTGAGGCTAAAGTTTAG 1038 0.4075 MESEKKSSSISNFGAWGMNVVSSVGIIMANKQLMSNNGYAFTFATTLTGFHFAVTALVGLVSNATGYSASKHVPLWELIWFSAIANISITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHGKHYSREVKTAVMVVVIGVGVCTVTDVKVNLKGFVCACLAVVSSSLQQISIGSLQKKYSIGSFELLSKTAPIQALSLIILGPFIDYYLSGKLITNFKMSSGAIIFILLSCTLAVFCNISQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTLKNIMGMILAVVGMVIYSWAVELEKSSNVKTLPHAKNSLTEEEIRLLREGIDNSPLKDVELGEAKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g06005 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 298 - -
Vivi4g06005 345 PANTHER SOLUTE CARRIER FAMILY 35 16 300 - -
Vivi4g06005 345 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g06005 Vivi-Chr4 197282295 197285472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g06005 16 345 Organic Solute Cotransporters AT1G77610 23.684 2.79e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g06005 K26224 - gmx:100817847 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g06005 4 197282295 197285472 Vivi4g06005 4 197282295 197285472 ECH
Vivi4g06005 4 197282295 197285472 Vivi1g04564 1 97452113 97455294 PCT