Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04564 ATGGCTCCTTCTAGTAAGGCTGAGAAGAAGGCAGCCGTAGATGCTGCTGCGTGGATGTTCAACGTTGTCACTTCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGGCGGTTATGGCTTCAGTTTTGCTACAACATTAACTGGTCTTCATTTTGTTACAACAACTTTGATGACGATCGTACTACGGATGCTGGGATACATCCAGCCTTCTCATCTTCCATTGTCCGAACTTCTAAAATTTGTTTTCTTTGCTAACTTCTCTATTGTTGGAATGAACGTCAGTCTTATGTGGAACTCAGTTGGATTCTATCAAATTGCCAAATTGAGTATGATACCTGTGTCCTGCTTGTTGGAAGTTTGTTTGGACAAGATTCGCTATTCAAGAGACACAAAACTGAGCATAGGTGTTGTTCTTTTGGGCGTTGGTGTTTGCACTGTCACTGACGTGAGTGTAAACACAAAAGGTTTTGTTGCCGCCTTTATAGCAGTGTGGAGCACTTCTCTGCAGCAATATTATGTTCATTATCTTCAACGGAAGTATTCGCTAAGTTCTTTCAGCCTTTTGGGACATACAGCACCCGCACAGGCTGGATCGCTACTCTTATTAGGCCCTCTTCTAGATTATTGGTTGACCAACAACAGAGTTGACCGATATGCTTACGATACACCCTCTGTGATGTTCATAATCCTGTCATGCACCATTGCAGTTGGGACCAACCTCAGCCAATTCATCTGCATTGGCAGATTTACTGCTGTGTCTTTCCAAGTACTTGGTCATATGAAGACAATACTTGTTTTAGTAATGGGATTCTTTTTCTTTGGAAAGGAAGGTCTCAATCTTCATGTAGTTGTAGGTATGATAATAGCTGTGGTTGGAATGATGTGGTATGGCAATGCGTCATCGAAGCCTGGCGGGAAGGAGCGTTGGAGTCATTCCCTCCCCACCAACAAAACAGAAAGCCGGTCATAG 972 0.428 MAPSSKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMGGYGFSFATTLTGLHFVTTTLMTIVLRMLGYIQPSHLPLSELLKFVFFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVCLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNTKGFVAAFIAVWSTSLQQYYVHYLQRKYSLSSFSLLGHTAPAQAGSLLLLGPLLDYWLTNNRVDRYAYDTPSVMFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLVMGFFFFGKEGLNLHVVVGMIIAVVGMMWYGNASSKPGGKERWSHSLPTNKTESRS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04564 323 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Vivi1g04564 323 MobiDBLite consensus disorder prediction 301 323 - -
Vivi1g04564 323 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04564 Vivi-Chr1 97452113 97455294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04564 18 320 Organic Solute Cotransporters AT1G21870 26.791 1.59e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04564 K26224 - vvi:100854983 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g06005 4 197282295 197285472 Vivi1g04564 1 97452113 97455294 PCT