Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05626 ATGAAGGCTATATTAGAAGAATTGCCAAAAGCAAAATCATTGAGTACAAAGAAAAATGGGACTAAGATAGAAGTACCGATTTTTTTAGGAGAAAAAATCGGTAAGGGAATGAAAATCGGAATGGTGAACATGAATGAAGATGATGACTTAAGTGAATGGAGCACACATGGAGAAACAATACCAATTAATTTCGACAAAGTATCACAATTTTTCAATTGGACAGATTTATTTCCCGAATGGATTGATGAAGAAGAAGAAAGCGACGTTCCAACATGTCCCGAAATACCTATGCCGGAATTCGAAGCATATGATAAAATGGATTTAATAGTTGCAAAGTTACCATGCAAGTATCCATTAGAAGGGTGGGGGAGAGAAGTTTTGAGGTTGCAAGTTCATCTTATTGTGGCAAATATGATTGTGAAAAAGGGAAAGAAAGATTGGAAATTGAAGAGTAGGGTTTTGTTTTGGAGTAAATGTAGACCAATGTTGGAGATTTTTAGATGTGATGATTTGGTTAAACATGAAGATGATTGGTGGTTATATGAAGTTGATGTAAAGAAATTGGAGCAAAAAGTTAGTTTGCCTATTGGGTCATGTAACTTGGCTTTGCCTCTATGGGAACAAGGGATAGACAAAGTATACGACATATCCAAAATGGAACAAACTGTAAAAAGCAAAACAAGAGCAAAACATGAAGCCTATGCAACAGTTCTACACTCTTCAGAAAGCTACGTTTGTGGTGCAATAACACTAGCACAAAGCCTTCTAAAATCCGGAACCAAACGCGACCTTATACTCCTCATCGACAACTCCATCTCCGCCCGCAAACGCCATGCATTGGCTGCGGCCGGTTGGAAGATTCGAACCATCACCCGAATTCGAAACCCGCGAGCCGAAAATGGAACTTACAATGAATATAATTATAGTAAGTTTCGGTTGTGGCAACTTACTGATTATGAGAAAATCATCTTCATAGATTCGGATATTGTCGTGCTTCGTAATCTTGATATTCTCTTCAACTTTCCTCAAATGACCGCAACCGGTAATGATCAATCGATTTTCAACTCCGGGATCATGGTTATTGAGCCCTCCAATTGTACATTCAGCGTGCTTATGAGTCGACGATATGATATCGTATCGTACAACGGAGGTGACCAAGGATTTCTAAATGAGATATTTGTATGGTGGCATAGGCTTCCAAGGAGGGTAAACTATTTGAAGAATTTTTGGTCAAACACAACAGTTGAAGCAAGTGTGAAAAATGGTTTATTTGGTTCTGATCCTCCAAAACTATATGCAATTCACTACCTTGGTTTGAAGCCATGGAATTGTTATAGAGACTATGATTGTAATTGGGATGTGGAGGATCAAAGGGTTTATGCTAGTGATGTGGCACACCAACGTTGGTGGAAATTTCATGATGGAATGGACAAGAAGTTACAAGGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTGAATTGGGAAAGAAGAAGATCTATGAAGATAGGATCACTTGATTATCATTGGAAGATTAATGTTACTGATCCTAGAAAATCTGGATCTCTTTTGATGGATTAG 1584 0.3813 MKAILEELPKAKSLSTKKNGTKIEVPIFLGEKIGKGMKIGMVNMNEDDDLSEWSTHGETIPINFDKVSQFFNWTDLFPEWIDEEEESDVPTCPEIPMPEFEAYDKMDLIVAKLPCKYPLEGWGREVLRLQVHLIVANMIVKKGKKDWKLKSRVLFWSKCRPMLEIFRCDDLVKHEDDWWLYEVDVKKLEQKVSLPIGSCNLALPLWEQGIDKVYDISKMEQTVKSKTRAKHEAYATVLHSSESYVCGAITLAQSLLKSGTKRDLILLIDNSISARKRHALAAAGWKIRTITRIRNPRAENGTYNEYNYSKFRLWQLTDYEKIIFIDSDIVVLRNLDILFNFPQMTATGNDQSIFNSGIMVIEPSNCTFSVLMSRRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWSNTTVEASVKNGLFGSDPPKLYAIHYLGLKPWNCYRDYDCNWDVEDQRVYASDVAHQRWWKFHDGMDKKLQGFCRLTRQRRTELNWERRRSMKIGSLDYHWKINVTDPRKSGSLLMD 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05626 527 SUPERFAMILY Nucleotide-diphospho-sugar transferases 233 481 IPR029044 -
Vivi4g05626 527 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 480 IPR029044 -
Vivi4g05626 527 PANTHER GLYCOGENIN SUBFAMILY MEMBER 124 520 - -
Vivi4g05626 527 FunFam Hexosyltransferase 229 480 - -
Vivi4g05626 527 Pfam Glycosyl transferase family 8 237 342 IPR002495 GO:0016757
Vivi4g05626 527 CDD GT8_Glycogenin 232 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05626 Vivi-Chr4 192059354 192062473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05626 1 526 Glycosyltransferase AT4G33330 68.550 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05626 K20890 - gmx:100780684 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05626 4 192059354 192062473 Vivi4g05626 4 192059354 192062473 ECH
Vivi4g05625 4 192059354 192062700 Vivi4g05626 4 192059354 192062473 PCT