Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05625 ATGGATGTTTCATCTCTTCATAAGTTGGTGAAGACAGCACCATCCAAAGCCTTGGTTGTTAGATTCAATTTGTTCTGCCTTTCCATCTTCTTGATTGTTTATGCAACTCTTCTTCTTCGTCCTTCGTCTTCGATCTATTTCGAAAATGCTGCTTCACTTGTTAGATGTTCATTGAGAGAATGCCATCATAAGGAAGAAAATAGCATAAAAATGAAGGCTATATTAGAAGAATTGCCAAAAGCAAAATCATTGAGTACAAAGAAAAATGGGACTAAGATAGAAGTACCGATTTTTTTAGGAGAAAAAATCGGTAAGGGAATGAAAATCGGAATGGTGAACATGAATGAAGATGATGACTTAAGTGAATGGAGCACACATGGAGAAACAATACCAATTAATTTCGACAAAGTATCACAATTTTTCAATTGGACAGATTTATTTCCCGAATGGATTGATGAAGAAGAAGAAAGCGACGTTCCAACATGTCCCGAAATACCTATGCCGGAATTCGAAGCATATGATAAAATGGATTTAATAGTTGCAAAGTTACCATGCAAGTATCCATTAGAAGGGTGGGGGAGAGAAGTTTTGAGGTTGCAAGTTCATCTTATTGTGGCAAATATGATTGTGAAAAAGGGAAAGAAAGATTGGAAATTGAAGAGTAGGGTTTTGTTTTGGAGTAAATGTAGACCAATGTTGGAGATTTTTAGATGTGATGATTTGGTTAAACATGAAGATGATTGGTGGTTATATGAAGTTGATGTAAAGAAATTGGAGCAAAAAGTTAGTTTGCCTATTGGGTCATGTAACTTGGCTTTGCCTCTATGGGAACAAGGGATAGACAAAGTATACGACATATCCAAAATGGAACAAACTGTAAAAAGCAAAACAAGAGCAAAACATGAAGCCTATGCAACAGTTCTACACTCTTCAGAAAGCTACGTTTGTGGTGCAATAACACTAGCACAAAGCCTTCTAAAATCCGGAACCAAACGCGACCTTATACTCCTCATCGACAACTCCATCTCCGCCCGCAAACGCCATGCATTGGCTGCGGCCGGTTGGAAGATTCGAACCATCACCCGAATTCGAAACCCGCGAGCCGAAAATGGAACTTACAATGAATATAATTATAGTAAGTTTCGGTTGTGGCAACTTACTGATTATGAGAAAATCATCTTCATAGATTCGGATATTGTCGTGCTTCGTAATCTTGATATTCTCTTCAACTTTCCTCAAATGACCGCAACCGGTAATGATCAATCGATTTTCAACTCCGGGATCATGGTTATTGAGCCCTCCAATTGTACATTCAGCGTGCTTATGAGTCGACGATATGATATCGTATCGTACAACGGAGGTGACCAAGGATTTCTAAATGAGATATTTGTATGGTGGCATAGGCTTCCAAGGAGGGTAAACTATTTGAAGAATTTTTGGTCAAACACAACAGTTGAAGCAAGTGTGAAAAATGGTTTATTTGGTTCTGATCCTCCAAAACTATATGCAATTCACTACCTTGGTTTGAAGCCATGGAATTGTTATAGAGACTATGATTGTAATTGGGATGTGGAGGATCAAAGGGTTTATGCTAGTGATGTGGCACACCAACGTTGGTGGAAATTTCATGATGGAATGGACAAGAAGTTACAAGGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTGAATTGGGAAAGAAGAAGATCTATGAAGATAGGATCACTTGATTATCATTGGAAGATTAATGTTACTGATCCTAGAAAATCTGGATCTCTTTTGATGGATTAG 1794 0.3802 MDVSSLHKLVKTAPSKALVVRFNLFCLSIFLIVYATLLLRPSSSIYFENAASLVRCSLRECHHKEENSIKMKAILEELPKAKSLSTKKNGTKIEVPIFLGEKIGKGMKIGMVNMNEDDDLSEWSTHGETIPINFDKVSQFFNWTDLFPEWIDEEEESDVPTCPEIPMPEFEAYDKMDLIVAKLPCKYPLEGWGREVLRLQVHLIVANMIVKKGKKDWKLKSRVLFWSKCRPMLEIFRCDDLVKHEDDWWLYEVDVKKLEQKVSLPIGSCNLALPLWEQGIDKVYDISKMEQTVKSKTRAKHEAYATVLHSSESYVCGAITLAQSLLKSGTKRDLILLIDNSISARKRHALAAAGWKIRTITRIRNPRAENGTYNEYNYSKFRLWQLTDYEKIIFIDSDIVVLRNLDILFNFPQMTATGNDQSIFNSGIMVIEPSNCTFSVLMSRRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWSNTTVEASVKNGLFGSDPPKLYAIHYLGLKPWNCYRDYDCNWDVEDQRVYASDVAHQRWWKFHDGMDKKLQGFCRLTRQRRTELNWERRRSMKIGSLDYHWKINVTDPRKSGSLLMD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05625 597 CDD GT8_Glycogenin 302 546 - -
Vivi4g05625 597 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 551 IPR029044 -
Vivi4g05625 597 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 300 550 IPR029044 -
Vivi4g05625 597 PANTHER GLYCOGENIN SUBFAMILY MEMBER 194 590 - -
Vivi4g05625 597 FunFam Hexosyltransferase 299 550 - -
Vivi4g05625 597 Pfam Glycosyl transferase family 8 307 513 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05625 Vivi-Chr4 192059354 192062700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05625 71 596 Glycosyltransferase AT4G33330 68.550 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05625 K20890 - gmx:100780684 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05625 4 192059354 192062700 Vivi4g05625 4 192059354 192062700 ECH
Vivi4g05625 4 192059354 192062700 Vivi4g05626 4 192059354 192062473 PCT