Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05097 ATGGATTCAGTTAACCCTTTGCCTGCTGATGGACTCGATGTGGTCCACCAAAACGGTGGTGATGATGAACCTTCTAATTCTGGAGAGGACGGTGTTGTTTCTAATGGTTTAGACTCCCATGTTCCTGAAACTACAGAAACTGTAGTTTTGAATGGAAATTTTGAAAATTTCGACCAGTCAGAAAGTGCTGCAACTGGAAACTCGGCTTTGAAGGAGACTGAAGGAACAAATGACTCTGTGGATGGCAATAATCTGACTGTTTCTAAAGATGGAGAGGAAAAGGAAGTGAAGATAACAGATCAAACTGAACAATCAAAAGCACAGAAGGTTCCTGTCAAGATTAAGAATGCAAAGGTTGCTAGTTCCAGTGGTGTTCGTGCTAGTTTGGTGAAAAACAGCAAAATTGGAAAAGACAAACCAGCATCATCTGCTGTTTCAAATGGAACATCTGCTATAGACTCCCGCCTAAAACAGCCTAGTAAAAGCAGGTCATTCAATGACCGGCAGTCTCAGCTGTCCAAGCACCCTTCAAAGTCTGATGCAGCATCTTCTCAAGTTGCAGCGGAGAAGAAAAATCCAAAATCATTGAAAAAGGGAACTCTTGATAAAGTTCAAGGAGAAGCAGAACCTTCTCTTACCAATGCAGAAGATGCCAAACCTCGCAGGGTGGGGACACTTCCAAATTATGGATTTAGTTTCAGGTGTGGTGAACGAGCTGAGAAAAGGAGAGAGTTCCTCAATAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTACTTTGCAGGCAAAATCCAAGGAGAGCCAAGAAGCCGAGATAAGAAAGCTTAGGAAGAGTCTAACTTTTAAAGCAACTCCAATGCCTACTTTCTATCAGGAGCCTGCTCCTCCTAAGGTAGAGCTGAAGAAGATACCAACCACAAGAGCAAAGTCTCCCAAGCTCGGCCGTAAGAAGACTTCCACAAATTCAGAGTCTGATGGAAACGGAAGCACCAGTTCTCGACAAGGTCGTTTAAGTCTGCAGGAGAAAGTGCTACAGAGCAACACCACTAAAGGAATTACCCCTGTCAATCAAAAGAAACCGATACGTAAGTCCCTTCCTACTCGACTGGCTTCTGAAAAGACCAATTCAACCGCCGCACCTACATCTAGGACAACAACAAAGAAAGACGCTGCCTTATCCAAAGCTACAACTGAAGAGAAAACCGAGATCGTTGCAGCCAATGAAGAGAAAACCGAAATCGTCGCAGCCAATGAAGAGAAAATCGAGATTGTTGCAGCCGATGAAGAGAACAATACTTTTTCCAGCGAGACAAATGTTGCTCTACCTCTGAACGTGGTTCCTTCAGATAAGCTAAGTGAAGAAGAATCTCATGTGAATGGTGACATAATAGTGGTCGAAGAGAATCCTCACCTTACATTGTCACCAGAACCGATCACGACTGTGCATTAA 1458 0.4362 MDSVNPLPADGLDVVHQNGGDDEPSNSGEDGVVSNGLDSHVPETTETVVLNGNFENFDQSESAATGNSALKETEGTNDSVDGNNLTVSKDGEEKEVKITDQTEQSKAQKVPVKIKNAKVASSSGVRASLVKNSKIGKDKPASSAVSNGTSAIDSRLKQPSKSRSFNDRQSQLSKHPSKSDAASSQVAAEKKNPKSLKKGTLDKVQGEAEPSLTNAEDAKPRRVGTLPNYGFSFRCGERAEKRREFLNKVEEKIQAKEEEKSTLQAKSKESQEAEIRKLRKSLTFKATPMPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNGSTSSRQGRLSLQEKVLQSNTTKGITPVNQKKPIRKSLPTRLASEKTNSTAAPTSRTTTKKDAALSKATTEEKTEIVAANEEKTEIVAANEEKIEIVAADEENNTFSSETNVALPLNVVPSDKLSEEESHVNGDIIVVEENPHLTLSPEPITTVH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05097 485 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 87 102 - -
Vivi4g05097 485 PANTHER PROTEIN WVD2-LIKE 4 95 437 IPR044833 GO:0008017
Vivi4g05097 485 MobiDBLite consensus disorder prediction 20 86 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 318 358 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 252 281 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 139 190 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 252 403 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 1 231 - -
Vivi4g05097 485 Coils Coil 239 276 - -
Vivi4g05097 485 MobiDBLite consensus disorder prediction 371 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05097 Vivi-Chr4 182003502 182007967 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05097 - - gmx:100786958 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05097 4 182003502 182007967 Vivi4g05097 4 182003502 182007967 ECH
Vivi4g05097 4 182003502 182007967 Vivi3g01341 3 21851208 21855971 PCT