Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01341 ATGGATCCGAGTGATTTTTCATTGGTAGATGGTTTTGAAGAAGCGGTGAATGTTGATTCAAATGTAGACTCCGTTGTTACTGAAACTGAAGAAAGTGGAATGGTGACGAACGGAGATGTTGAAAATTTTGATGATGATTTGTGTAAGGAAGAATTGAAAGAAGGATTGAATGGGAAAGTAGAGGGAAACAATGTTGAAATTTTGAAGGACGAGGACGGTGAAATCGGAGATGAAACGGAGAAATTGAAATCTAGAACATCGAATGGTCCGGTGAAGGATAAGAAAGTGAAACAACTGAGTGGTAAAGGTGTGAATGCAGGTTTGGTGAGAAAGAGCAAAGTCGGGAAAGATGAAGAGGTGGCAGCAGCAGCGGCTGTTTCGAATGGTACTTTGAGTTTAGACTCGAATCCGAGACAGGCGGTTAAGAGCAGAGCGTTGAACGACAAGCAGACTCGATTGAACAAGCAAGCTGGAAAGTCTGATGCAGCGTCTTCTGAAGCACCAATGGAGAAGACTAGACCTCAATTGATAAAGAAAGAACCCCTTGATAATCTTCAAGGAAATGCTGACTTATCTTCTCCTACAACAGAAGATGGCAAGCCTCGCAGAATGGGGACAATGCCAACTTATGGATTTAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTCGAGGAAAGGATTCATGCGAAGGAAGTGGAGGAGAGCAACATGCAAGCAAAAACCAAGGAGAGCCAAGAAGCTGAGATTAGGAGGCTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAACCTCCTCCTTCTCGGGTGGAGTTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAGAAGAATTCAACATCTTCAGAGCTAGAAGAAAACACCAGAAGCAATGCTCAACAATGTCGTTTAAGTCTGGATGAGAAATTATCTCAGAATACCCCCACTAAAGGAATTAGTCCCGTTCACCCAAAGAAGCCACAACGAAAATCTCTCCCTCCTCGACTGACTCCTGAAAGGATCAGTTCATCCAATACATCAGCTGCACGGACTCCGTCTAAGACGGTGAATGATGAGAAAGCCTCCTTATCTAGTGTAACAACTGATGTTACCACCTTGTCTATTGCAACAAAGGAAGAGACTGTTGAAGCAGCTGCAGCTATTGAGGAGAACAATGCCTTGTCCGACAAGACAAGTGAAACCCCATCTCTTAACATAGATCCAGGTGAAGTAGAATCCTACGAGAATGGGGATATAGTCATTGAAGACAAACCACAGCTTGCCTTGGTACAAGAGCCTATAGCAGCAGAGTATTAA 1368 0.4313 MDPSDFSLVDGFEEAVNVDSNVDSVVTETEESGMVTNGDVENFDDDLCKEELKEGLNGKVEGNNVEILKDEDGEIGDETEKLKSRTSNGPVKDKKVKQLSGKGVNAGLVRKSKVGKDEEVAAAAAVSNGTLSLDSNPRQAVKSRALNDKQTRLNKQAGKSDAASSEAPMEKTRPQLIKKEPLDNLQGNADLSSPTTEDGKPRRMGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNMQAKTKESQEAEIRRLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRKKNSTSSELEENTRSNAQQCRLSLDEKLSQNTPTKGISPVHPKKPQRKSLPPRLTPERISSSNTSAARTPSKTVNDEKASLSSVTTDVTTLSIATKEETVEAAAAIEENNALSDKTSETPSLNIDPGEVESYENGDIVIEDKPQLALVQEPIAAEY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01341 455 PANTHER PROTEIN WVD2-LIKE 4 85 425 IPR044833 GO:0008017
Vivi3g01341 455 MobiDBLite consensus disorder prediction 21 42 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 126 211 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 406 434 - -
Vivi3g01341 455 Coils Coil 227 257 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 128 161 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 354 386 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 21 36 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 308 336 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 409 423 - -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 76 98 - -
Vivi3g01341 455 Pfam Targeting protein for Xklp2 (TPX2) domain 212 282 IPR027329 -
Vivi3g01341 455 MobiDBLite consensus disorder prediction 268 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01341 Vivi-Chr3 21851208 21855971 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01341 - - gsj:114408962 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01341 3 21851208 21855971 Vivi3g01341 3 21851208 21855971 ECH
Vivi4g05097 4 182003502 182007967 Vivi3g01341 3 21851208 21855971 PCT