Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05055 ATGGATCCTCTCAAACAAAAACCTAAGTGTCTATGGATTCATGGACCTATCATTGTAGGAGCTGGTCCTTCTGGTATAGCAGTAGCTGCTTGTTTATCAGAACAAGGTGTTCCAAGTCTTATTCTTGAGAGAAGTGACTGTATAGCTTCACTATGGCAAAATAGAACCTATGACCGTTTGAAACTTCACTTACCTAAACATTTTTGTGAGCTTCCTCTCATGAGTTTTCCTCTAGATTTTCCTAAGTATCCTACCAAACATCAGTTCATTTCTTACATGGAATCCTATGCTGATCAGTTTGGTATTCGTCCTAGGTTTAACCAAACTGTTATCAGTGCTGAGTTTGATCCAAGTTTGGAAATTTGGAATGTTATGACACTTGATGGTTTTCAGTATTCTTCACCTTGGCTTGTTGTTGCTACTGGTGAAAATGCTGAACCTGTTATTCCTAAGATTCATGGTATGGAACATTTTCATGGTCTTGTTGTTCATACTTGTGACTATAAATCTGGTTCTCAGTACAAAAACAAGAAGGTTTTGGTTGTTGGTTGTGGGAATTCTGGTATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTCTACCTCACTTGGTTGCTAGAAACACAGTACATATGCTTCCAAGAGATATCTTTGGTTTCTCAACATTTGGAGTAGCAATGACATTAAACAAATGGCTTCCATTAAAATTAGTAGACAAGTTCCTCTTACTAGTCTCAAGCTTCTTCTTGGGAAACACCAATCACTATGGTATCAAAAGGCCTAAAACTGGTCCTATAAAGCTTAAACTAGCAACAGGAAAAACTCCTGTCCTTGATGTTGGTCAAATTGCTCAAATTAAATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAAGAGTGGTGCAAAATTTATGGATGGACAAGAAAAGGAATTTGATGCAATAATCTTAGCAACAGGTTACAAGAGCAATGTGCCAAGTTGGCTTAAGGGAAGTGATTTTTTCACTAAAGATGGAATGCCTAAAACACCCTTTCCTCATGGATGGAAAGGAGAGCAAGGATTGTATACAGTAGGGTTCACAAAAAGAGGACTACATGGAACATATTTTGATGCTATCAAGATATCTGAAGATATAACAAATCAATGGAAAACAATTGAGAACAAGAGTTGTTGTAGTGATTCACATATCATAAACCTTAATAGTGTTTAG 1221 0.3718 MDPLKQKPKCLWIHGPIIVGAGPSGIAVAACLSEQGVPSLILERSDCIASLWQNRTYDRLKLHLPKHFCELPLMSFPLDFPKYPTKHQFISYMESYADQFGIRPRFNQTVISAEFDPSLEIWNVMTLDGFQYSSPWLVVATGENAEPVIPKIHGMEHFHGLVVHTCDYKSGSQYKNKKVLVVGCGNSGMEVSLDLCRHNALPHLVARNTVHMLPRDIFGFSTFGVAMTLNKWLPLKLVDKFLLLVSSFFLGNTNHYGIKRPKTGPIKLKLATGKTPVLDVGQIAQIKSGNIKVMEGVKEITKSGAKFMDGQEKEFDAIILATGYKSNVPSWLKGSDFFTKDGMPKTPFPHGWKGEQGLYTVGFTKRGLHGTYFDAIKISEDITNQWKTIENKSCCSDSHIINLNSV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05055 406 SUPERFAMILY FAD/NAD(P)-binding domain 17 212 IPR036188 -
Vivi4g05055 406 Gene3D - 16 389 IPR036188 -
Vivi4g05055 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Vivi4g05055 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Vivi4g05055 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Vivi4g05055 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Vivi4g05055 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Vivi4g05055 406 Pfam Flavin-binding monooxygenase-like 18 329 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vivi4g05055 406 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Vivi4g05055 406 FunFam Flavin-containing monooxygenase 16 391 - -
Vivi4g05055 406 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 389 - -
Vivi4g05055 406 SUPERFAMILY FAD/NAD(P)-binding domain 175 374 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05055 Vivi-Chr4 181442893 181445155 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05055 K11816 - gmx:100818280 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05055 4 181442893 181445155 Vivi4g05055 4 181442893 181445155 ECH
Vivi4g04886 4 178595775 178600603 Vivi4g05055 4 181442893 181445155 PCT