Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04886 ATGGACTCTTACCTGAGAGAAATAGAAGGAAAACAAGCCAATGATCCTTTATTCATAGAGAAAATGAACAAAAACAACATCAATTCAACTTCTTCGAAAGAAAGATGTTTATGGATTCCAGGTCCATTGATAGTAGGAGCAGGACCTTCAGGACTGGCAGTAGCAGCATACCTAAAACAAAAAGGTGTTCCAAGCTTAATACTAGAAAGATCAAACTGCATAGCCTCACTATGGAAACTAAAAACCTACGACCGACTTCGTCTTCATTTACCGAAACAAGTTTGCGAGCTTCCATTGATGAAATTCCCTTCTGGTTTCCCAACATATCCAACAAAACAACAGTTCATAGAGTATTTGGAAAATTACTCGGAGAAATTCGATATTAGGCCTTGGTTCAATGAGACAGTGAAGCATGCTGAGTTTGATGGTACACTTGGATTTTGGAGGGTGAGGAGTGAGGGGAAAGGAGGGATGGTTACCGAGTTTGTTTGTCGGTGGTTGATCGTTGCGACGGGGGAGAATGCAGAGGCGGTGGTGCCGGAGATGGAAGGAGTTGGTGAGTTTGGAGGTAGTATAAAGCATACTAGTTTGTATAAAAGTGGTGAGGAGTTTAGAGGGAAGAAAGTTTTGGTTGTTGGATGTGGGAATTCTGGTATGGAAATTTGTTTGGATCTTTGTAATCATGATGCTGCTCCTTCTATTGTGGTTAGAGATTCAGTACACATCCTACCAAGAGATATGCTGGGAAAATCAACTTTTGGGCTGTCCATGTGGTTGCTCAAGTGGCTGCCTATGCAGCTTGTGGATTGCATCCTTCTCATCATGTCCTGGCTATTGCTCGGCGACACGGCGCGATTCGGTTTGGTTCGGCCCCGTGTGGGACCCCTTGAACTCAAAAAATTGTCTGGAAAGACACCGGTCCTAGATGTGGGTGCCCTTGCCAAGATTAAAAGAGGAGACATTAAGGTACATCCAGGAATCAAGAGGTTAAAACGTTACACAGTGGAATTTGTTGATGGAAAGATAGAAAATTTTGATGCCATCATATTGGCAACTGGTTACAAAAGTAATGTACCTTATTGGCTAAAGGATGAGGATATGTTCTCTAAGAAAGATGGATACCCTAGGAAGCCATTTCCTAATGGATGGAAAGGTGAAAATGGCCTCTATGCTGTTGGTTTCACCAAACGTGGACTTCTTGGTGCATCTATGGATGCAAAAAATATAGCTCAAGATATTGAATGGTGTTGGAAATCTGAGGCTAAGCATACTTTTGCTTTTGCTCTATTGCCACAATCCAAGTCATGA 1308 0.4228 MDSYLREIEGKQANDPLFIEKMNKNNINSTSSKERCLWIPGPLIVGAGPSGLAVAAYLKQKGVPSLILERSNCIASLWKLKTYDRLRLHLPKQVCELPLMKFPSGFPTYPTKQQFIEYLENYSEKFDIRPWFNETVKHAEFDGTLGFWRVRSEGKGGMVTEFVCRWLIVATGENAEAVVPEMEGVGEFGGSIKHTSLYKSGEEFRGKKVLVVGCGNSGMEICLDLCNHDAAPSIVVRDSVHILPRDMLGKSTFGLSMWLLKWLPMQLVDCILLIMSWLLLGDTARFGLVRPRVGPLELKKLSGKTPVLDVGALAKIKRGDIKVHPGIKRLKRYTVEFVDGKIENFDAIILATGYKSNVPYWLKDEDMFSKKDGYPRKPFPNGWKGENGLYAVGFTKRGLLGASMDAKNIAQDIEWCWKSEAKHTFAFALLPQSKS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04886 435 Pfam Flavin-binding monooxygenase-like 44 361 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vivi4g04886 435 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 43 422 - -
Vivi4g04886 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 41 63 - -
Vivi4g04886 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 204 228 - -
Vivi4g04886 435 SUPERFAMILY FAD/NAD(P)-binding domain 205 413 IPR036188 -
Vivi4g04886 435 Gene3D - 42 421 IPR036188 -
Vivi4g04886 435 SUPERFAMILY FAD/NAD(P)-binding domain 43 241 IPR036188 -
Vivi4g04886 435 FunFam Flavin-containing monooxygenase 42 422 - -
Vivi4g04886 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Vivi4g04886 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 42 61 - -
Vivi4g04886 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04886 Vivi-Chr4 178595775 178600603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04886 K11816 - gmx:100804746 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04886 4 178595775 178600603 Vivi4g05055 4 181442893 181445155 PCT