Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05051 ATGGGTAGTGAGAATGAAATGATCCCATGTCTAGATTTTTCAGGAGTTGATGATAATATTGAAGGGAGTGAAGAATGGGAAAAAATGAGTGGAAAAGTGAGAGAGGCATTGGAGAGTTATGGTTGTTTCATATTAATGTATGATAAGAACAAGATTCCAAAGAGTTTGTGTGAGAACATGTTACTAGGAATGAAAGAGTTGTTTGATTTACCGGAAGAAGTTAAGAGGAAGTATGTAAGTACAAGGCCTTACAGCAGCTACAAAAGTGATTGTCCTAAGTTTCCTCTAACTCAAACCTTTGGAATTGATGATGCTTTTGTTGAGGATAATGCTCTTGCTTTTACTAGTCTCATGTGGCCTCAAGGAAATTCAACTTTCTGTGAGACAATGAAGACCTTGAGCTCCAAGATGCATGAATTGAGCTTTCTTATTCTGAAGATGATTAAAGATAGCTATAATCTTCCAAAACAATACTCTTCCGATATTGAAGACTTGAAGAATACCGGCCATCTACGAGTGATGAAATACAAAATTCCTAAAACCAACCAAGATTGTGAAATAGCTTTGTTACCACATACCGACAAAAGTACCTTAACCATGTTATACCAAAACGAAGTCCAAGGTTTACATGTTCAAACCAAAGCAAATAAATGGATTCAATTGAACATACCTCAAGAAGGCTTTGTTGTCATAGTTGGTGACATACTCAAGGCATGGAGTAACGGAAGACTTCACGCACCTACGCATAAAGTAATGATGTGTGGAGAGAAAGAACGATACTCATTTGCTGAATTTACACTTCCAAAAGAAGATGTGAAAATTGAGGTACCAAGTGAATTGGTGGATGATGAAGTGCATCCTCTTCGTTATAGATCATTCACTTATGGAGATTACTTGAAGTACTATGTTTCAACCCTTAAGGAAAATGCACTAGAAGCATATTTAGGTGTTTGA 954 0.3658 MGSENEMIPCLDFSGVDDNIEGSEEWEKMSGKVREALESYGCFILMYDKNKIPKSLCENMLLGMKELFDLPEEVKRKYVSTRPYSSYKSDCPKFPLTQTFGIDDAFVEDNALAFTSLMWPQGNSTFCETMKTLSSKMHELSFLILKMIKDSYNLPKQYSSDIEDLKNTGHLRVMKYKIPKTNQDCEIALLPHTDKSTLTMLYQNEVQGLHVQTKANKWIQLNIPQEGFVVIVGDILKAWSNGRLHAPTHKVMMCGEKERYSFAEFTLPKEDVKIEVPSELVDDEVHPLRYRSFTYGDYLKYYVSTLKENALEAYLGV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05051 317 SUPERFAMILY Clavaminate synthase-like 8 305 - -
Vivi4g05051 317 FunFam 2-oxoglutarate-dependent dioxygenase DAO 6 315 - -
Vivi4g05051 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 88 IPR026992 -
Vivi4g05051 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 300 - -
Vivi4g05051 317 PRINTS Isopenicillin N synthase signature 228 254 - -
Vivi4g05051 317 PRINTS Isopenicillin N synthase signature 192 213 - -
Vivi4g05051 317 PRINTS Isopenicillin N synthase signature 294 312 - -
Vivi4g05051 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Vivi4g05051 317 Gene3D - 5 314 IPR027443 -
Vivi4g05051 317 Pfam 2OG-Fe(II) oxygenase superfamily 170 266 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05051 Vivi-Chr4 181357663 181360426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05051 8 302 Glycosyltransferase AT5G59530 23.127 2.17e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05051 - - gmx:100817159 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05051 4 181357663 181360426 Vivi3g01272 3 21141217 21142469 PCT