Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01272 ATGGATACTGAGAGCGGAATCCCAATTTTAGATTTCCGTAAAAGCATTGGAGTGACATTAGAAGAAGGAAGTGAAGGATGGAAAGAAATGAGTAAAAAGGTGAGAGAAGCATTTGAGAGTCATGGTGTTTTTCTTTTAAGGTGTGATGAAATATCAAATGAATTACAAAAAGAAATGTTTACAAGCATGAAATCTTTGTTTGAGCTACCTGAAGAAACAAAGCTGAAATTCACAGGCTCAAGGCTTGCTAGAGGCTACTTAGGAAAGAGTCCTTCCATTCCCCATAGTCAATCATTTGGGATCGAAGATGCTTTTAAGCTAGATACAACTCAAAATTTCACTAACCTCATGTGGCCTGAAGGCAATCCAACATTTAGTGAGACACTATTTTCTTTTACCTCAAAAGCACTGGAACTAAGCTCTCTTATTCTAAAGATGGTTGTCGAGGGATTTGGCCTTCCAGAAAAATACATTTCAGAAGTTGAAGAATTGAGTAGCGACACTGATTCACGATTGACAAGGTACCAACTCCCTGAGAAAAACAAAGATTCTGCAGTTACTTTTGTTCCTCACACCGACAAAGGGAGCATAACCCTTATATGTGAGAACAAAATCCAAGGTTTGCAGGTGTTACAAAAATCAGGCAATTGGGTTAACGTAAATGTTCCTACGAATGGATTTATTGTAATGGTTGGTGACATGTTGCAGACATGGAGCAATGGGAGATTTAAAGCACCAATGCACAGAGTGGTGTTAAAAGGAGACAGAGAGAGATTTGTGTTTGTTCTTTTTTCAGTGCCAAAGGAAGACACACTCATCAAAATTCCCTCTGAATTGGTAGATGAAGAAGATCATCCTCTCCGTTACAAGCCATTCAAATATGAGGAGTTCATGAATTTTATTAAAGTAGTTGGCACTAAAGAGGGGGCTCTTGAAGAATTTGCTGGACTTTGA 954 0.3847 MDTESGIPILDFRKSIGVTLEEGSEGWKEMSKKVREAFESHGVFLLRCDEISNELQKEMFTSMKSLFELPEETKLKFTGSRLARGYLGKSPSIPHSQSFGIEDAFKLDTTQNFTNLMWPEGNPTFSETLFSFTSKALELSSLILKMVVEGFGLPEKYISEVEELSSDTDSRLTRYQLPEKNKDSAVTFVPHTDKGSITLICENKIQGLQVLQKSGNWVNVNVPTNGFIVMVGDMLQTWSNGRFKAPMHRVVLKGDRERFVFVLFSVPKEDTLIKIPSELVDEEDHPLRYKPFKYEEFMNFIKVVGTKEGALEEFAGL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01272 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 267 IPR005123 -
Vivi3g01272 317 Gene3D - 5 312 IPR027443 -
Vivi3g01272 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 298 - -
Vivi3g01272 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 106 IPR026992 -
Vivi3g01272 317 FunFam 2-oxoglutarate-dependent dioxygenase DAO 5 315 - -
Vivi3g01272 317 Pfam 2OG-Fe(II) oxygenase superfamily 171 264 IPR044861 -
Vivi3g01272 317 SUPERFAMILY Clavaminate synthase-like 5 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01272 Vivi-Chr3 21141217 21142469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01272 7 297 Glycosyltransferase AT5G59530 26.471 1.10e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01272 - - tpra:123920789 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05051 4 181357663 181360426 Vivi3g01272 3 21141217 21142469 PCT