Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05019 ATGGCTTTGGGGAGCAATGAGAAAAGAAAATCAATTTTGAATGTGAGACTTGGAATGGATTCTGATTCTCTCAGAAGCCCCACTTCACCACTTGATGTTACTTTGCTTTCAAATAGAGGTAACACGTTAAGAACAATGTCACCTGATCAAGGACAAAAAAGGGGTTGGGACTGTACCAAAGTAGGTTTAAGTATCATAGATTCCTTGGAAGATTGTTCTAAATTTTCTAGGAATGTTCTTATGTCAACTGAGTTCAACAAGGGTAGTAGTCTCAGTCCTAATCCTAGTCCTCGAATGATTACTAAAGTGCCGAGCTATAATCGCTGTTTGGATTCTGTTAAGGCTTCTAGGTCGTTGCCGAAAGATTTTTTTAAGCTGCCTTATACTCGTAATAGTTCTGTTTTTCGTAAGGGTGAATCGAGTGTTGTTTTTGAAATCGGTGAAACGTTGGTAGAACATGAGTTACCCTTTGGGAAATCAATGTCTTGTTTGTTGGACTTTTACAAAAGTCCGATTAAAGATTATAACTTGGATGATTCGAAACCAGTGAGTTCTCCTCGTTTTATTGGAGAAAATATGAATCCAAACATGTTGCTACCGATGTCTCTATCTGCAAGTGAGATTGAAAACTCTGAGGACTATACTTGTGTTATTTCGCATGGTCCTAATCCGAAGAAAACACATATTTATTGTGATTGCATACTGGATGTTCATGCTGGTGGTGATGTTAAAAAACTTCCAAATGAGAATGAAGAGAAGGAGGGTTTGTTTTGTTCCACGGTTGACCGATTAGCGACTCCAAAACAATTTCCCCCGGCTGAGTTTTTGACTTTCTGCAACAGCTGCAACAAGAAGTTTGAAGAGGGTAAAGATATTTACATCTATAGAGGTGAAAAGGCATTTTGCAGTTTAACTTGCCGCACCCTCGAGATTATGATTGATGAGGAGCTAGAGAAATCCAATGCACCACCATCTGAGAACTCTATCGAGTATGAATCTGGTGGAGAAGTTTTTGGATCTGGCATCTTCACTGCTGAATAG 1041 0.391 MALGSNEKRKSILNVRLGMDSDSLRSPTSPLDVTLLSNRGNTLRTMSPDQGQKRGWDCTKVGLSIIDSLEDCSKFSRNVLMSTEFNKGSSLSPNPSPRMITKVPSYNRCLDSVKASRSLPKDFFKLPYTRNSSVFRKGESSVVFEIGETLVEHELPFGKSMSCLLDFYKSPIKDYNLDDSKPVSSPRFIGENMNPNMLLPMSLSASEIENSEDYTCVISHGPNPKKTHIYCDCILDVHAGGDVKKLPNENEEKEGLFCSTVDRLATPKQFPPAEFLTFCNSCNKKFEEGKDIYIYRGEKAFCSLTCRTLEIMIDEELEKSNAPPSENSIEYESGGEVFGSGIFTAE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05019 346 ProSiteProfiles Zinc finger FLZ-type profile. 274 318 IPR007650 -
Vivi4g05019 346 PANTHER FCS-LIKE ZINC FINGER 11 18 345 IPR044585 -
Vivi4g05019 346 Pfam zinc-finger of the FCS-type, C2-C2 269 316 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05019 Vivi-Chr4 180628126 180630604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05019 - - tpra:123914586 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05019 4 180628126 180630604 Vivi4g05019 4 180628126 180630604 ECH
Vivi3g01186 3 19843309 19845736 Vivi4g05019 4 180628126 180630604 PCT