Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01186 ATGCTGAGGAAGAGAAGCAGTTCAAACCAGAAAGATCAACAAAACATGGGTTATTTGACAAATTCTGATGCTAATTCGGAAAACTTCGGTCGCAATATCAAAGGCAACTTGATTTTCAATATGCCTTGTTTGTTTGTGGGTTTAGGTCCAAAAGGGTTTTTGGATTCGGATTCGGTTAGAAGTCCAACTTCACCTCTAGATACTAAAGTTCTTTCGAATTTAGGTAACCCTGTTAGGAACCAAAGATCTTCACTTTTTGAGGAGAATCGGAGGAGTTGGGATTGTTGCAAAGTTGGGTTAAGTATTGTAGAGTCTTTGGAAGATTGTAACTGTTCTAGGTTTTGTCGAAAAACTCTTCAAATGATGATCAAAACAACTCCAATTTGTGAAACTTGTATGGATTCTTTTGAGTCATCTGAGTCTTTGCCTAAAGATTTTTGTACCCGTAATGAATCTCTTATCCGTAAGGGTGAATGTGAATCCAATGTCCTTTTTGAGATCGGTGAAACTAGCTTAGAACTTGATGAACCGTTCGGGAGAACTAGGTCTTGTTCAATGAATTCGTGCAAATCATTGAAAGCTAGTGATTCAAATATTGATGATTTTGATATGAAAGATGCAGCGTTTCAAGTTAGCTTTTCTCCTCATTTTATTGGAGGAAACGAGAACTCAAATGCTATTGCATCGGCAGAGTCGAAACCAAACACTTTGTCCATGTGTTCTTCCGATGAAATTTTGAAGTCTCTATCGGCTAGTGAGATTGAGCTTTCTGAGGATTATACATGTGTGATCTCTCGTGGTCCAAATCCCAAAACAACTCATATTTTTTGTGATTGCGTTTTGGAAACTCGTCCTGATTTATGTGTTAAAAACCATTTTAAGAATGAAGAGCATGAGAAGGAGAAGGTAGTGACTCCGATTGCTAAAGGGTTACAGACTCCAAACCGATATCCCTCTCGTGCCTTCTTAAGTTTCTGTCACCATTGCGACAAGAAACTCGAGGAGGGGAAAGATATTTACATCTATAGAGGTGAAAAAGCATTTTGCAGCTTAACTTGTCGCGAAATGGCAATTATGATCGATGAAGAGCTTGAGAAATCCAACCCTCCTTGTGAGAACTCTCCAAAACCGAAACCCGGTGAGCAAATTTTTGAAACAGGAATCCCAGCAATCATATAA 1179 0.3868 MLRKRSSSNQKDQQNMGYLTNSDANSENFGRNIKGNLIFNMPCLFVGLGPKGFLDSDSVRSPTSPLDTKVLSNLGNPVRNQRSSLFEENRRSWDCCKVGLSIVESLEDCNCSRFCRKTLQMMIKTTPICETCMDSFESSESLPKDFCTRNESLIRKGECESNVLFEIGETSLELDEPFGRTRSCSMNSCKSLKASDSNIDDFDMKDAAFQVSFSPHFIGGNENSNAIASAESKPNTLSMCSSDEILKSLSASEIELSEDYTCVISRGPNPKTTHIFCDCVLETRPDLCVKNHFKNEEHEKEKVVTPIAKGLQTPNRYPSRAFLSFCHHCDKKLEEGKDIYIYRGEKAFCSLTCREMAIMIDEELEKSNPPCENSPKPKPGEQIFETGIPAII 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01186 392 Pfam zinc-finger of the FCS-type, C2-C2 316 363 IPR007650 -
Vivi3g01186 392 MobiDBLite consensus disorder prediction 1 23 - -
Vivi3g01186 392 ProSiteProfiles Zinc finger FLZ-type profile. 321 365 IPR007650 -
Vivi3g01186 392 MobiDBLite consensus disorder prediction 7 23 - -
Vivi3g01186 392 PANTHER FCS-LIKE ZINC FINGER 11 1 390 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01186 Vivi-Chr3 19843309 19845736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01186 - - gmx:100779553 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01186 3 19843309 19845736 Vivi4g05019 4 180628126 180630604 PCT