Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05005 ATGGCGGAAGAGAAGGCGGTTACTAGCGGCGGCGGTGGTGGTGGTGAGAAGAAAGAGAAGACGAGTGACACTGTTGATTCTTCTACTCGTGAAGACGGAAAGAAGAAGCGTAAAGGTTTATTTTCTCGAATTTGGAATTTTGTGTTTAGGTCTAATAGAGATAATTTGGAGAAAAGGCTTCAGAGTATTTCTAAGGAAGAATCTTCGGTTATGAGTAGGATGAACAAGAGATCCCGTTCGTGGAGGCGAGCTTCTCGCCATATTATTATTTTTTCGGTTTTGTTTGAGGTCATTGCCGTAGCTTATGCTATTATGACAACAAGAACTGTGGATATGAATTGGAAAATGAGGGCAATTCGAGTTTTGCCGATGTTTCTTTTGCCTGCATTTTCATCTGCTGCATATTCAACATTTGTAAGCTTCATAAGGATGTGTGATCGCAGGGACCAGAAAACTCTCGATAGGCTGAGAGCTGAAAGGAAGGAAAAAATTGACGACCTCAAAGAGAAGACAAACTATTACATTACTCAACAACTCATTCAGAAATATGATACAGACCCAGCAGCAAAGGCGGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGAATCAGGTTTGAAATTGCACATGGCAGATGAATCTAAATCTGGTGCTCCGACAGGAAAGACCAACAATATTGAACCTGTGCAGTCTAGTGGACTTAGGAATCGCAGACAAGGGCAAGCTCAATCCACTACTCTGGGAACAACCACTGCAAATCCTCCCGATCAACAATTAGTTGCTTCTAGGGGAACTGATCAAACTCAGACCCGCATTCAGAAACAGGTTGTAGTTGTTGAGCATCACCAACCTCAAAGCTCAACGAAGTATGATGGAGGATGGATTGCTCAAATTGCAGCATTGCTTGTTGGTGAGGATCCAAAGCAGTCTTATGCACTCATATGTGGTAACTGCTATATGCATAATGGTCTTGCTCGCAGAGAGGATTTCCCATTTATCACTTACTACTGCCCACACTGCCACGCCCTGAACAAACCAAAGCATTCAGCTGAGCCCATATCTGCTATTAATTCGACAAACACCAGGTCCCCTAAAACAGATGATGGAGAGGCAGAGGCAGCTAAAAATGATAATATTTGTGCTTCTGACAGTTTGGTCACACCAATAAATGCTACCCATGAGATCGAGCACACATCTGAAGAGGTTGATTTAGGAGGTAATGAAGAAAGCTAG 1236 0.432 MAEEKAVTSGGGGGGEKKEKTSDTVDSSTREDGKKKRKGLFSRIWNFVFRSNRDNLEKRLQSISKEESSVMSRMNKRSRSWRRASRHIIIFSVLFEVIAVAYAIMTTRTVDMNWKMRAIRVLPMFLLPAFSSAAYSTFVSFIRMCDRRDQKTLDRLRAERKEKIDDLKEKTNYYITQQLIQKYDTDPAAKAAAATVLASKLGAESGLKLHMADESKSGAPTGKTNNIEPVQSSGLRNRRQGQAQSTTLGTTTANPPDQQLVASRGTDQTQTRIQKQVVVVEHHQPQSSTKYDGGWIAQIAALLVGEDPKQSYALICGNCYMHNGLARREDFPFITYYCPHCHALNKPKHSAEPISAINSTNTRSPKTDDGEAEAAKNDNICASDSLVTPINATHEIEHTSEEVDLGGNEES 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05005 411 MobiDBLite consensus disorder prediction 213 268 - -
Vivi4g05005 411 Coils Coil 153 173 - -
Vivi4g05005 411 MobiDBLite consensus disorder prediction 1 36 - -
Vivi4g05005 411 MobiDBLite consensus disorder prediction 356 378 - -
Vivi4g05005 411 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 34 385 IPR040115 GO:0071786
Vivi4g05005 411 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 295 345 IPR019273 -
Vivi4g05005 411 MobiDBLite consensus disorder prediction 16 36 - -
Vivi4g05005 411 MobiDBLite consensus disorder prediction 218 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05005 Vivi-Chr4 180409934 180419427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05005 K23292 - gmx:100815496 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05005 4 180409934 180419427 Vivi3g01169 3 19568754 19572556 PCT