Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04765 ATGGTGAATTCCATGGTTGAACGCGCCACGAGCGACATGCTCATCGGTCCCGATTGGGCCATGAATATCGAGATCTGTGACATGCTCAATCATGACCCTGGGCAAGCAAAGGACGTTGTCAAAGGTATAAAGAAGCGGATTGGAAGTAGACATTCTAAAGCTCAACTCCTTGCATTGACTTTGCTGGAGACAATCATAAAGAACTGTGGGGATATTGTTCACATGCATGTTGCAGAGAAAAATGTGCTTCATGAGATGGTGAGAATAGTAAAGAAAAAGCCTGATTTTCAAGTCAAAGAGAAGATATTGGTTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCAAGATATCCACAATATTATGCTGCATACCAGGAGCTGTTGCGTGCCGGGGCTGTATTCCCTCAGAGATCTGAACAGTCTGCACCTGTATTCACTCCTCCACAAACCCAACCATTGGCTTCATACCCTCCAAACATACGTGGCATGGATGGTCAGCCTGACACAGCTGAGACATCTGCAGAATCAGAATTTCCGACACTAAGTTTGACCGAAATACAGAATGCACATGGTATAATGGACGTTCTCGCGGAAATGCTCAATGCAATAGACCCTAACAACAAAGAAGGGCTTAGACAGGAGGTTGTTGTTGATTTGGTAGAGCAGTGTAGAACATACAAGCAAAGAGTGGTCCACCTTGTAAACTCAACTACGGATGAATCATTGCTATGCCAGGGACTAGCTCTCAATGATGATCTGCAGCGTGTACTTGCCAGGCATGAATCTTTTTTGTCAGGACTTTCTACTCAAAATGGAAACCACTTGGAGAATTCAAAACCTGCACCTGCTGGGCCACTTGTAGATGTTGATGCCCCATTGGTTGATACTGGAGATAGTGGCAAACAAACTGATGGGAGGTCTTCTTCTGGTGCTGAAGCAGGCTCGCAAACATTGAATCAGTTAATGCTTCCCGCACCAGCTACATCTAATGGTTCTGCTGTACCTGCCAAAGTTGATCCCAAGTGGGACCTTCTCAGTGGTGATACCTATGATTCTCCAAAAGCAGATACTTCACTTGCTCTTGTTCCTCTGGGAGAACAACATGCTGCCAGTCCTGTGTCTGATCAGAACGCCCTTGTTCTTTTTGATATGTTTTCTAACGGAGACAATGCACCCACGCCTGTCAATACCCAGCCAACCCAGCAAACTAATGTTGCTGGCCAATCTGGTCCATTTACTCCTCAATTTCAACAACAGCAGACTTTTATATCTCAAGGTGGATTTTACCCTAATGGAAGTGTGCCAAATGCTGGTTCCCCTCAGTATGAGCAATCACCGCTCACACAAAGTACAGCTCCTGCCTGGAATGGTCAGATTCCCAATGGAAGTGTGTCAAATTCTGGTTCTCATCAGTATGAGCAATCACTGCATACACAAAGTACAGGTCCTGCCTGGAATGGTCAGGTTGCAGAACAGCAACAGCCAGCTTCTCCTTATGGTGCGCAAAATAGTGGATCATTGCCGCCACCTCCATGGGAAGCTCAACCAGCTGACAATGGCAGTCAGCTAGCAGGCGCACAGTATCCACAACCACCGCAAATCAGTCATATGGCTACAACACATGTACAAAGTGCTGCAAATCATCAAATGCCTCAAGCAATGGGTTATGGCCAGGCTGGTGGTATGTATATGCAGCCGAATGTGAACAATCATTTGTCAGCAAACAATAACCATTTTGGAAACAATCAATTAGGCATGCCCCCTCAGCACATGCAAGGTGGTGCAGTGAACTACATGGGGATGGCTTCACATCAAATGCAAGGTGGTCCTGCAGTTTCCATGTATCCACAACAGATGTATGGAAACCAATTTGTAGGTTATGGCTACGGTCAACAACAACAACAACACGGAGTTCCTTACATTGAGCAGCAAATGCATGGAATGTCTGTAAGAGACGATAGTTATTTGCGAAACTCTAATCAGGTGTCTACATCTTATGTTCCATCAGGGAAGCCGTCCAAGCCAGAGGATAAGTTATTTGGGGACCTTGTGAACATGGCAAAAGTGAAGCCAAAACCATCTCCAGCTCGAGCTGGTAGCATGTAA 2115 0.4563 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRHSKAQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVRIVKKKPDFQVKEKILVLIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPPNIRGMDGQPDTAETSAESEFPTLSLTEIQNAHGIMDVLAEMLNAIDPNNKEGLRQEVVVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLALNDDLQRVLARHESFLSGLSTQNGNHLENSKPAPAGPLVDVDAPLVDTGDSGKQTDGRSSSGAEAGSQTLNQLMLPAPATSNGSAVPAKVDPKWDLLSGDTYDSPKADTSLALVPLGEQHAASPVSDQNALVLFDMFSNGDNAPTPVNTQPTQQTNVAGQSGPFTPQFQQQQTFISQGGFYPNGSVPNAGSPQYEQSPLTQSTAPAWNGQIPNGSVSNSGSHQYEQSLHTQSTGPAWNGQVAEQQQPASPYGAQNSGSLPPPPWEAQPADNGSQLAGAQYPQPPQISHMATTHVQSAANHQMPQAMGYGQAGGMYMQPNVNNHLSANNNHFGNNQLGMPPQHMQGGAVNYMGMASHQMQGGPAVSMYPQQMYGNQFVGYGYGQQQQQHGVPYIEQQMHGMSVRDDSYLRNSNQVSTSYVPSGKPSKPEDKLFGDLVNMAKVKPKPSPARAGSM 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04765 704 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Vivi4g04765 704 MobiDBLite consensus disorder prediction 303 317 - -
Vivi4g04765 704 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Vivi4g04765 704 Gene3D - 1 135 IPR008942 -
Vivi4g04765 704 Pfam GAT domain 196 269 IPR004152 GO:0035091|GO:0043130
Vivi4g04765 704 FunFam TOM1-like protein 2 1 148 - -
Vivi4g04765 704 CDD GAT_GGA-like_plant 188 266 - -
Vivi4g04765 704 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Vivi4g04765 704 MobiDBLite consensus disorder prediction 428 536 - -
Vivi4g04765 704 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Vivi4g04765 704 Gene3D - 183 275 IPR038425 -
Vivi4g04765 704 MobiDBLite consensus disorder prediction 428 506 - -
Vivi4g04765 704 PANTHER TOM1-LIKE PROTEIN 1 702 IPR044836 GO:0035091|GO:0043130|GO:0043328
Vivi4g04765 704 CDD VHS 2 132 - -
Vivi4g04765 704 SUPERFAMILY GAT-like domain 141 269 - -
Vivi4g04765 704 MobiDBLite consensus disorder prediction 393 416 - -
Vivi4g04765 704 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Vivi4g04765 704 MobiDBLite consensus disorder prediction 271 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04765 Vivi-Chr4 176885511 176893553 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04765 - - gmx:100809022 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04765 4 176885511 176893553 Vivi4g04765 4 176885511 176893553 ECH
Vivi4g04765 4 176885511 176893553 Vivi3g02992 3 49911539 49917423 PCT