Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04619 ATGGCAAAAGTTTGTTGGCCATACTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTATGGACAATGATAGTTGCCATGATTGTACATTGATCAAGATTGATAGTGTCAATAAACCAGGAATTCTGCTGGAAGTCGTGCAAATCCTAACAGACCTTGACTTCATTATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGACATCAAAATTATCGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCGCAAAAGCACAGAAGGTGGGAAAAGTTGGTCAGACAAACGAGTTGGTGTGCACTCTGTTGGTGATCATACAGCCATTGAGCTCATTGGTAAGGATCGCCCAGGTCTCTTGTCAGAGATCTCAGCTGTCCTTGCAAGCCTCCAATTCAACGTGATTGCAGCTGAAGTTTGGACTCATAACAGGCGAATAGCATGTGTTCTCTATGTCAATGACGCTACAAACCAAGCTATGGATGATGACCCAAAAAGGTTATCTATTATTGAGGAGCAGCTCAACCACATCCTACGAGGATGTGAGGATGATGAGAAAGTGGCTCGAACCAGTTTCTCCATGGGTTTCACCTTCACCCACATGGACAGAAGGCTCCACCAAATGTTGTTTGCTGATAGGGATTATGAGAGTGCTGGAGTAACCACAACAAATGTTGATTGTCCTCCCTCTTTCAGGCCAAATATCAGAATAGAACGTATCGAGGAAAAAGGCTACTCAGTTGTTAGTGTGAAATGCAAAGATCGTGCAAAATTGATGTTTGACATTGTCTGCACTCTCACTGACATGGAATATGTTGTTTTTCATGCCTCAATCTCATCTGACGGCCCTTATGCATCACAGGAGTATTTCATCAGACACGTGGATGGGTGCACACTTGACACTGAAGGGGAGAAAGAAAGGGTCGTCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGCTTGCTGTCTGAAGTGACTAGGATTCTACGAGAGAATGGCTTGACAGTTTGTAGGGCAGGTGTATCAACCATTGGAGAGAAAGGACTAAATGTTTTCTATGTAAGAGATGCATATGGAAACCCTGTGGACATGAACATTATTGATGCGTTGCGTAAAGAAATCGGCCAGACTGTAATGGTCAATGTGAAGAAGGTACCAGCCCACACGAAAGCGCCAGAAACATCCCGAGGATGGGCTAGAGTAAGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGAACTAA 1359 0.4386 MAKVCWPYFDPEYENFSNRINPPRVSMDNDSCHDCTLIKIDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDIKIIDFIEKALGPKGRKSTEGGKSWSDKRVGVHSVGDHTAIELIGKDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDDPKRLSIIEEQLNHILRGCEDDEKVARTSFSMGFTFTHMDRRLHQMLFADRDYESAGVTTTNVDCPPSFRPNIRIERIEEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHASISSDGPYASQEYFIRHVDGCTLDTEGEKERVVKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEKGLNVFYVRDAYGNPVDMNIIDALRKEIGQTVMVNVKKVPAHTKAPETSRGWARVSFFFGNLLERFLN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04619 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 421 IPR040217 -
Vivi4g04619 452 CDD ACT_ACR_3 268 342 - -
Vivi4g04619 452 ProSiteProfiles ACT domain profile. 37 109 IPR002912 -
Vivi4g04619 452 Gene3D - 125 202 - -
Vivi4g04619 452 ProSiteProfiles ACT domain profile. 348 425 IPR002912 -
Vivi4g04619 452 SUPERFAMILY ACT-like 32 105 IPR045865 -
Vivi4g04619 452 CDD ACT_ACR_1 35 106 - -
Vivi4g04619 452 SUPERFAMILY ACT-like 344 413 IPR045865 -
Vivi4g04619 452 Pfam ACT domain 37 85 IPR002912 -
Vivi4g04619 452 Pfam ACT domain 131 172 IPR002912 -
Vivi4g04619 452 ProSiteProfiles ACT domain profile. 131 215 IPR002912 -
Vivi4g04619 452 SUPERFAMILY ACT-like 126 202 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04619 Vivi-Chr4 174160936 174167730 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04619 - - gmx:100797658 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04619 4 174160936 174167730 Vivi4g04619 4 174160936 174167730 ECH
Vivi4g04619 4 174160936 174167730 Vivi3g02968 3 49731774 49736163 PCT