Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02968 ATGAGTGCAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAACAGAATCAACCCTCCAAGGGTAACAGTGGACAATGCTAGTTGCCGTAACTGTACACTAATCAAGTTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATTTTGACAGACCTTGATTTTATAATTACCAAAGCTTACATATCTTCTGATGGAGGATGGTTCATGGATGTATTTCATGTCACGGATCAGCATGGAAAAAAGATAACAGATGACAAAACCATTGACCTCATTGAAAAGGCTCTAGGACCGAAAAGCCAGAGTAAAGAAGGAGTGAAGAATTGGGCAGGAAAACGGGTTGGGGTGCATTCTGTGGGTGATCATATAGCCATTGAGCTAATCGGGAGAGACCGCCCCGGTCTCTTGTCTGAGATATCAGCTGTACTTGCCAGCCTCCATTTTAATGTTACCGTAGCTGAAGTTTGGACTCATAACAGGAGAATAGCTTGCGTCCTTTATGTCAATGATGGTACGAGACAAGCGGTGGATGATCCTAAAAGACTGTCTCTTGTGGAGGAACAACTCAACAACATCTTACGCGGATGTGAGGACGGTGATAAAGTTGCTAGTAGAACTAGTCTCTCCATGAGTTTCACCCATATCGATAGACGGCTCCACCAGATGTTGTTTGCTGATCGGGATTATGAAAGTTCTGGAGTAACGACGACAGAAAGTGAAAGTCCTCCCTCTTTCCGGCCAAAAATAACAATAGAATGTTGCAAGGAAAAAGGCTACTCAGTGGTTAGTGTCAGGTGCAAAGATCGCGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGGAATATGTTGTTTCCCATGCCACAATCTCATCAGACGTCCCTTACGCATCCCAGGAATATTTTATTCGACACATGGACGGATGCACGCTTGATACAGAAGGAGAGAAAGAAAGGGTCATCAAATGCATCGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTAAGCTTAGAATTGTGTGCAAAGGATAGAGTGGGATTGTTGTCTGAAGTAACAAGGATTCTAAGAGAGAATGGCCTGACAGTATGTAGGGCAGGTATATCAACTAGAGGGGAGCAAGCACTGAATGTGTTCTATGTGAGGGATGCATCAGGGAACTCAGTGGACATGAAAACTATAGAAGCACTTCGTAAAGAAATAGGCAAGACAATGATGGTGGATGTTAAGAAGGTACCAACATATGACAAAGAACCAGAGACAAAAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGGCTTAA 1347 0.4269 MSAVCWPYFDPEYENFSNRINPPRVTVDNASCRNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQHGKKITDDKTIDLIEKALGPKSQSKEGVKNWAGKRVGVHSVGDHIAIELIGRDRPGLLSEISAVLASLHFNVTVAEVWTHNRRIACVLYVNDGTRQAVDDPKRLSLVEEQLNNILRGCEDGDKVASRTSLSMSFTHIDRRLHQMLFADRDYESSGVTTTESESPPSFRPKITIECCKEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVSHATISSDVPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEQALNVFYVRDASGNSVDMKTIEALRKEIGKTMMVDVKKVPTYDKEPETKGWAKTSFFFGNLLERFLA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02968 448 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Vivi3g02968 448 Pfam ACT domain 37 85 IPR002912 -
Vivi3g02968 448 Pfam ACT domain 131 199 IPR002912 -
Vivi3g02968 448 CDD ACT_ACR_3 265 339 - -
Vivi3g02968 448 ProSiteProfiles ACT domain profile. 345 422 IPR002912 -
Vivi3g02968 448 SUPERFAMILY ACT-like 32 105 IPR045865 -
Vivi3g02968 448 Gene3D - 340 422 - -
Vivi3g02968 448 CDD ACT_ACR_4 343 414 - -
Vivi3g02968 448 Gene3D - 128 201 - -
Vivi3g02968 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 418 IPR040217 -
Vivi3g02968 448 FunFam ACT domain repeat 6 343 421 - -
Vivi3g02968 448 SUPERFAMILY ACT-like 125 200 IPR045865 -
Vivi3g02968 448 ProSiteProfiles ACT domain profile. 130 211 IPR002912 -
Vivi3g02968 448 CDD ACT_ACR_1 35 105 - -
Vivi3g02968 448 SUPERFAMILY ACT-like 341 412 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02968 Vivi-Chr3 49731774 49736163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02968 - - vvo:131632599 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02968 3 49731774 49736163 Vivi3g02968 3 49731774 49736163 ECH
Vivi4g04619 4 174160936 174167730 Vivi3g02968 3 49731774 49736163 PCT