Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04608 ATGGTAGCATGTGTCGACATGGCTTTCCCCGTACTCCTCTCACCTCCTTACCCCTCTTTCTCCAAGCCCGCTTCATTCTTAAGCAACACTAGAACCCCGGGCCTAGGCTCGGGTTTGGGCTCGGGCCTGGGCTTTCAGTTTCAAAGCAAACGAACAAGAATACGCAGACACCTCAAGCTCCTTATCGGCGCTCAACTTTCCAACTCATTCTCTTTCACCTTCGGGCTCGACTCTCCGAATTTGAAATCCTTTCAATCTCATGATCTATCAAAGTTGTCATGGAGGGGACCGGTTCCCGGTGATATTGCCGAAGTCGAGGCATATTGTAGGATCTTTAGAAACTCCGAACGGCTTCATTCTGCGTTAATGGATGCATTATGCAATCCGTTGACTGGAGAATGTAGTGTCTCGTATGAGGTTCCGTCGGACGAGAGGCCTCAACTTGAAGATAAGATAGTTTCTGTGCTCGGATGTATGGTGTCGCTTGTGAATAAAGGGAGGGATGATGTTCTTACGGGGAGGTCGTTAGTTATGAATCCGTTTCATGATGCTGATGATAGCGCGATTGAGGATAAGCTTCCTCCGCTTGCTGTTTTTAGGAGCGAGATGAAAAGGTGTTCGGAGAGTTTACATGTGGCTCTTGAGAATTATTTAGTACCTGATGATGATCGGAGTTTGAACGTGTGGAGGAAACTTCAGAGACTGAAGAATGTTTGTTATGATTCTGGTTTTCCTCGTCGCGAGGGTTATCCTTGTTATACATTGTTTTCTAATTGGAGTCCTGTGTATTTTTCTAGTTCTAAAGATGAAACAGAATCCCAAGACTTAGAAACGGCTTTTTGGACTGGTGGTCAAGTAACCGAAGAAGGACTGAAGTGGTTAATCGATAAAGGATTTAAGACGATTATCGACATCAGAGCCGAGACTGTAAGAGATAATTTCTATCAAGAGGCTGTGAATGATGCTATTTCATCGGGAAAAATTGAGTTAGTGAAAATTCCGGTTGAAGTTATGACTGCACCAACAATGGAACAAGTTGTGAAATTTGCATCTTATGTCTCAGATAGCAGCAAAAGGCCTGTCTATCTTCATAGCAAGGAAGGGGTTTGGAGATCATCTGCCATGGTCTCCCGATGGAGGCAGTACATGACTCGCTCTTCGTCGCAGAATGTTTCTAGTCCACCAATTACTCCCGCTAACATGTCACATTCTACAAATAACTCCGTGAAACTGCAGGATTCTTCTGTGACTGTAGCAAGATCCTCGGTCGAAAACGATATCACTTCATTGCAAGAAAGTTTCGATTCAAAATCCGACACAAGTATCTCTGAAAACGGCTATGATGAAGAACCACAAGGTAATGCAGCCTTAAATGGAATTTCTCCTGATAATACGATATCGGAGACAGATGTCAATGCTGCTAATAAGGAAGGATCTTTTCCAAGTTTTAGCAGCACAATCAACCCTTTAAAAGCTCAAGTTCCTCCTTGTGATATCTTTTCCAAAAATGTGATGTCCAAATTTTTGGGTAGCAGGAAGATCTCATCTCCTGATTATGTCGATTATCGAATTAAAAGGGCAAAATGCTTACCACAATTTAAGAATATGGCTATTAGAGGACTTCAAAGAGATATTATTGTTTCTAATGATGCTGTTGTTGGTCCTGATAGCTTAAATGGATCGGCTCATGTTGATTATCCATCTGGAGAGGCCGAAGTTGGAGTCGGCGGCAATGGGAAGTTAGTGAATGGAAATACTTCTAGTTCTGGTAGGACAGCAACAGTTAACGGATTTAGTCAAGGAGAATTGCATTTCACGGCTAATGCCAATGTCTCCGGCGCTGTAAATAATGATAATGTCACAACTAAATCTCAAAGGGTTGAAGATGGTACAGTTAAGGCTGGGTTAAGTTTATACGATGAAGAATTGAAAACCATTGAAGGCGATATGTGTGCGTCGTCAACGGGAGTTGTAAGGGTTCAGTCAAGAAAAAAAGCAGAGATGTTCTTGGTTCGAACAGATGGGTTTTCTTGTACCAGAGAAAAGGTCACTGAATCTTCTTTAGCTTTCACTCATCCTAGCACCCAGCAACAGATGCTTATGTGGAAGTCTACACCAAAAAATGTGTTATTATTAAAAAAACTCGGGGATGAACTTCTCGAAGAAGCAAAAATGGTTGCTACTTTTCTACATCACCAAGAGAAAATGAATGTAATTGTGGAACCTGATGTGCATGATGTTTTTGCTAGAATGTCAGGTTTTGGATTTGTACAAACCTTCTACAGCCATGATACCAGCGATCTACACGAGAGAGTAGATTTTGTTGCATGCTTAGGGGGAGATGGTGTTATACTGCATGCGTCAAATCTTTTCAGAGACGCTGTTCCTCCTATTGTATCATTCAACCTTGGTTCCCTTGGTTTTCTGACTTCTCATAGTTTTGACGACTTCAAACAAGACTTAAGACAAGTCATTCATGGAAATACATCACGGGACGGTGTCTACATTACTCTTAGGATGCGTCTCCGATGTGAAATTTTTCGTAAAGGTAAAGCAATGCCGGGGAAAGTATTTGATATCCTCAACGAGGTGGTTGTCGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCGACTTATAACCAAAGTACAAGGTGATGGAGTCATCGTTGCCACCCCTACGGGAAGTACTGCCTATTCTACTGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATATTATTTACCCCAATCTGCCCACATTCGCTGTCATTTAGACCAGTCATACTTCCAGATTCTGCTCGATTAGAATTAAAGATTCCAGAAGATGCTAGAAGTAACGCGTGGGTTTCGTTTGATGGAAAGAGAAGACAACAGCTCTCAAGAGGAGACTCAGTCCGAATACATATGAGTGAGCATCCCCTCCCAACTGTTAACAAGTTTGACCAGACAGGCGATTGGTTCCGTAGTTTGATTCGTTGCCTAAATTGGAATGAGAGGCTTGATCAAAAGGCGCTATAA 3045 0.425 MVACVDMAFPVLLSPPYPSFSKPASFLSNTRTPGLGSGLGSGLGFQFQSKRTRIRRHLKLLIGAQLSNSFSFTFGLDSPNLKSFQSHDLSKLSWRGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPLTGECSVSYEVPSDERPQLEDKIVSVLGCMVSLVNKGRDDVLTGRSLVMNPFHDADDSAIEDKLPPLAVFRSEMKRCSESLHVALENYLVPDDDRSLNVWRKLQRLKNVCYDSGFPRREGYPCYTLFSNWSPVYFSSSKDETESQDLETAFWTGGQVTEEGLKWLIDKGFKTIIDIRAETVRDNFYQEAVNDAISSGKIELVKIPVEVMTAPTMEQVVKFASYVSDSSKRPVYLHSKEGVWRSSAMVSRWRQYMTRSSSQNVSSPPITPANMSHSTNNSVKLQDSSVTVARSSVENDITSLQESFDSKSDTSISENGYDEEPQGNAALNGISPDNTISETDVNAANKEGSFPSFSSTINPLKAQVPPCDIFSKNVMSKFLGSRKISSPDYVDYRIKRAKCLPQFKNMAIRGLQRDIIVSNDAVVGPDSLNGSAHVDYPSGEAEVGVGGNGKLVNGNTSSSGRTATVNGFSQGELHFTANANVSGAVNNDNVTTKSQRVEDGTVKAGLSLYDEELKTIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSTPKNVLLLKKLGDELLEEAKMVATFLHHQEKMNVIVEPDVHDVFARMSGFGFVQTFYSHDTSDLHERVDFVACLGGDGVILHASNLFRDAVPPIVSFNLGSLGFLTSHSFDDFKQDLRQVIHGNTSRDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIHMSEHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04608 1014 MobiDBLite consensus disorder prediction 386 406 - -
Vivi4g04608 1014 Pfam ATP-NAD kinase C-terminal domain 861 987 - -
Vivi4g04608 1014 Gene3D Protein tyrosine phosphatase superfamily 268 405 IPR029021 -
Vivi4g04608 1014 Pfam ATP-NAD kinase N-terminal domain 720 828 IPR002504 GO:0003951|GO:0006741
Vivi4g04608 1014 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 710 1009 IPR016064 -
Vivi4g04608 1014 Gene3D - 841 981 IPR017437 GO:0003951|GO:0019674
Vivi4g04608 1014 PANTHER NAD KINASE 297 1014 - -
Vivi4g04608 1014 MobiDBLite consensus disorder prediction 429 460 - -
Vivi4g04608 1014 Gene3D - 696 1006 IPR017438 -
Vivi4g04608 1014 MobiDBLite consensus disorder prediction 429 448 - -
Vivi4g04608 1014 FunFam NAD kinase 2, chloroplastic 841 981 - -
Vivi4g04608 1014 FunFam NAD kinase 2, chloroplastic 696 860 - -
Vivi4g04608 1014 Hamap NAD kinase [nadK]. 707 1005 IPR002504 GO:0003951|GO:0006741
Vivi4g04608 1014 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 278 382 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04608 Vivi-Chr4 174055543 174060598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04608 K00858 - gmx:100820030 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04608 4 174055543 174060598 Vivi4g04608 4 174055543 174060598 ECH
Vivi4g04608 4 174055543 174060598 Vivi3g03058 3 51737184 51743227 PCT