Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03058 ATGTTGGCATGTAGTCTTTGCGCCTGTAACATGGCATTCTCCGCCACCTTCAACAATGCCACAATCTTTCCCTTCCGCTTCCAATTTCACACCAACCTCACTCCACGAACAACACACCTCGCCACCGCTCAACTCTCCAACTCCTTCTCCTTTCATTCCGCTTTCGATTCTCTGAATTTGAAGTCCATTGAATCCCATGATGCATCAAGGTTACCTTGGATTGGTCCAGTTCCGGGTGATATTGCTGAAGTGGAGGCATATTGTAGAATTTTTAGAAATTCTGAGAGCCTTCATTCTGCGTTAATGGATGCTTTATGTAACCCTTTCACTGGTGAATGTAGTGTTTCGGATGATGTTCCGTCTCATGAGAAACCTGTTCTAGAAGATAAAATAGTTTCTGTACTTGGATGTATGGTTGCACTTGTCAAGGGTGGGAGAGAGGATGTTCTTTCTGGGAGATTTTCTGTTATGTCTCGCTTTCGGGCTTCTGAGGTTAGCGTTGTGGGGGAAACGCTACCCCCACTTGTGGATTTTAGGAGTGAGATGAAAAGGTGCTGTGAGAGTTTACATGTTGCTCTTGAGAACTATTTGGTTGCTGGTGATGATCGGGGTTTGGAGGTGTGGAGGAAACTTCAGAGACTGAAGAATGTTTGCTATGATTCTGGTTTTTCTCGTGAAGAGGATTATCCGTGTCCTGCAGTATTTGCAAACTGGTGTCCTGTATATTTGTCCAGTTCTAAAGAGGACTTGGAAGGAAAAGAATCTGAAGCTGATTTTTGGATAGGTAGCCAGGTAACCGAAGAAGGTCTTAAGTGGCTACTGGATAGAGGATATAAAACTATTGTGGATCTCAGAGAAGAGACAGTAAAAGATGATTTTTATCAAGCTGCTGTGCGTGATGCTGTTTCATCTGGAAGTATTGAATTGGTGAAAATCCCGGTTGAAGTTGGGACTGCGCCAAAAATGGAACAGGTTATGAGGTTTGCATCTCTTGTTTCTGATGTTAGCAAAAGGCCAATCTATCTGCACAGTAAAGAAGGAGTTTGGAGAACGTCTGCGATGGTTTCCAGATGGAGGGAATACATGGCCCACTCGGCATCACAGTGTGTTTCTAATCAAGCAGTTATTTCCAATGACATGTTATCAGATTATACAAATGATGCTGGGAAACTGCAGGATTCAGAGCCTGCTGAGAGATCCTCTCTGGAAAAAGATACTGATTTGTTGCAAGAGGATTTAGGTGCAATTCATAGTTCTGTTGACTCATTTGATCCGAGTACCTCTCCAAATAAGATTAATGAAGAAACACAAAGTAATAGGACCTTAGGTGGAATTTTCCCCAATGATAGGACTTCATCACAAGCCATGACTGCTGACGGGGAAAGTTACTCTCCAACTTTCTCAAGCAAAACTAACCCTTTGGAAGCTCAAGTTCCTCCTCATGACATCTTTTCCAAAAAAGAGATGGCCAGATATTTTGAAAGTAAGAAGATTTCAAAACTCTCTTGTTCCAGTAATCAAGTCAAAAGGTTGGAATGCTTGCCAGATTCAAGGAGCATGCATAATAGAAGACAGCAGGGGCAAGTGATTATCAACAGTGGTCATAATCCTAAAGTTGTGGGTCCAGCAGGAAGTTCCAATGGGTCAGCTCAGATTGCAGTTGGTAACAAGTTGAAGTTAGTGAATATGAATGCATCCAGTTCTGTAAGGACAACAGTAAATGCTTTTAGTGAAAGAGAAATGTATTGCATGCCTGATGCCAACGATATTGATAATACAACTAACTCTCAAAGGATTTTAGCCGATGAGGATAAGGCGGGGGAAGGCTTGGGATTCACTGAAGGGGACATGTGTGCATCTTCAACAGGAGTTGTAAGGCTGCAATCAAGAAAAAAAGCAGAGATGTTCCTAGTACGAACAGATGGATTTTCTTGTGTGCGAGAGAAGGTTACCGAATCTTCTTTGGCCTTCACGCATCCTAGCATTCAGCAACAAATGTTAATGTGGAAATCTACCCCAAAGACTGTTTTATTGTTGAAAAAGCCTGGGAAGCATCTCATGGAAGAAGCTAAAGAGGTTGCTTCTTTTTTATATTACCAAGAGAAAATGAACGTATTCGTGGAACCGGATGTGCATGATATATTTGCTAGAATTACAGGATTTGGATTCGTTCAGACCTTCTATATACAAGATACTTGTGATCTACACGAGAAAGTAGATTTTGTGGCATGTTTGGGGGGAGATGGCGTTATATTGCATGCTTCAAATCTATTTAGAGGTGCTGTTCCACCTGTTGTGTCATTTAATCTTGGTTCCCTTGGTTTTCTGACTACTCATAGTTTTGAAGACTACAAGCAGGACCTACGACAAATCATCCATGGAAATAATAAACGAGATGGTGTATACATCACTCTTAGAATGCGTCTCCGATGTGAAATTTTCCGTAAGGGCAAAGCTATGCCAGGGAAAGTATTTGATATTCTCAATGAAGTTGTTGTTGATCGGGGTTCTAATCCGTACCTTTCAAAGATTGAATGCTATGAACATGACAGGCTTATAACAAAAGTACAAGGTGATGGAGTGATCATAGCCACCCCTACCGGAAGCACTGCTTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCATGCATGCTGTTTACCCCAATCTGTCCACATTCACTCTCATTTCGACCAGTTATACTTCCAGATTCCGCCCAACTTGAATTAAAGATTCCAGAGGATGCTAGAAGCAATGCCTGGGTTTCATTTGACGGGAAGAAAAGGCAACAGCTTTCAAGAGGAGATTCTGTACGAATATCAATGAGTCAGCATCCTCTTCCAACAGTTAACAAGTTTGACCAAACAGGTGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGACTTGACCAAAAGGCCCTATAA 2946 0.4192 MLACSLCACNMAFSATFNNATIFPFRFQFHTNLTPRTTHLATAQLSNSFSFHSAFDSLNLKSIESHDASRLPWIGPVPGDIAEVEAYCRIFRNSESLHSALMDALCNPFTGECSVSDDVPSHEKPVLEDKIVSVLGCMVALVKGGREDVLSGRFSVMSRFRASEVSVVGETLPPLVDFRSEMKRCCESLHVALENYLVAGDDRGLEVWRKLQRLKNVCYDSGFSREEDYPCPAVFANWCPVYLSSSKEDLEGKESEADFWIGSQVTEEGLKWLLDRGYKTIVDLREETVKDDFYQAAVRDAVSSGSIELVKIPVEVGTAPKMEQVMRFASLVSDVSKRPIYLHSKEGVWRTSAMVSRWREYMAHSASQCVSNQAVISNDMLSDYTNDAGKLQDSEPAERSSLEKDTDLLQEDLGAIHSSVDSFDPSTSPNKINEETQSNRTLGGIFPNDRTSSQAMTADGESYSPTFSSKTNPLEAQVPPHDIFSKKEMARYFESKKISKLSCSSNQVKRLECLPDSRSMHNRRQQGQVIINSGHNPKVVGPAGSSNGSAQIAVGNKLKLVNMNASSSVRTTVNAFSEREMYCMPDANDIDNTTNSQRILADEDKAGEGLGFTEGDMCASSTGVVRLQSRKKAEMFLVRTDGFSCVREKVTESSLAFTHPSIQQQMLMWKSTPKTVLLLKKPGKHLMEEAKEVASFLYYQEKMNVFVEPDVHDIFARITGFGFVQTFYIQDTCDLHEKVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTTHSFEDYKQDLRQIIHGNNKRDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIIATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKKRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03058 981 Gene3D - 663 973 IPR017438 -
Vivi3g03058 981 FunFam NAD kinase 2, chloroplastic 808 948 - -
Vivi3g03058 981 Hamap NAD kinase [nadK]. 674 972 IPR002504 GO:0003951|GO:0006741
Vivi3g03058 981 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 678 976 IPR016064 -
Vivi3g03058 981 PANTHER NAD KINASE 280 981 - -
Vivi3g03058 981 Pfam ATP-NAD kinase C-terminal domain 828 954 - -
Vivi3g03058 981 MobiDBLite consensus disorder prediction 420 475 - -
Vivi3g03058 981 Gene3D Protein tyrosine phosphatase superfamily 251 387 IPR029021 -
Vivi3g03058 981 Pfam ATP-NAD kinase N-terminal domain 708 794 IPR002504 GO:0003951|GO:0006741
Vivi3g03058 981 Gene3D - 808 948 IPR017437 GO:0003951|GO:0019674
Vivi3g03058 981 FunFam NAD kinase 2, chloroplastic 663 827 - -
Vivi3g03058 981 MobiDBLite consensus disorder prediction 419 478 - -
Vivi3g03058 981 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 259 368 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03058 Vivi-Chr3 51737184 51743227 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03058 K00858 - gmx:100796381 1472.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03058 3 51737184 51743227 Vivi3g03058 3 51737184 51743227 ECH
Vivi4g04608 4 174055543 174060598 Vivi3g03058 3 51737184 51743227 PCT