Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04604 ATGGCGGACGACAACTCCAATCCCGACGCGGCCGCCGCTAACGATTCGTCCAAACCGCCTTCCTCGACGTGTATTCGAATAGGCGACCGTCAACTCTTCCATGTTGAGCTCCGCCCTGGCGAGACCACCATTGTGTCGTGGAAGAAGCTTCTCAAGGACGCTAATAAGACCAATGAGGGATCCACTTCCGCGGCTCCCGAGCAAGTTCCCAAAGCAAACCCCGCGCTCGAAGCTAGAATCGCTCCTGGACAAGCCGAGAATAATGAACAAGATGCGCCCCAAACAAACCGTTTCAGCGCTGTAATAGAGAAGATTGAACGGCTTTACATGGGTAATGATAGTGACGATGAGGATCTACCTGTTGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAACTGGATGAGTATTTTGAGGTTGACGATTCTGTAATCAAACATGACGGTTTCTTCATAAATAGGGGAAAATTGGAACGCATAAATGAACCTCCGGCATTACCTAATCAGCCAGCAAAGAAAAGGTGCCGAAAAGATATATTGAAGAATCCAGGTGAAAACATTGATGGACGTGTATCAAATAAGCATGTAAAAGTGGGCAAGACAGCTGCAGGAAAGACTGCGCCGTTACCCGTGAAGAATACACTTAATTCCTCACAGAATTTGGCTGTACCTGGTGAACATTATGCAGACTTGAAATCTCAAAATCAATTGGAGGTCTCCAGAACTACTTTGAAAAAGGAACCGGCTGATATTAGACCAATTTCAGATCCTTCTGCCTCTTTGAAAGTATCAAATAATGATGTCTCTTCTGCGGTAGAAGCCAAAGATGCTGATAAGCAGAAGACAATACTTCAATCTAAGAACAGAGTGGATAAACATAAAGATGCAAGTGGAGTGCATGATACTTCTCATCAGAAGCACCAAGAAAAAAAAGTTTCTGTACCTTCTAAATCCCAACTTGGAGGAGTCCCAAGTAGTATTGATGATTTAGAAAATACTGGTAGATCCAAAGAAAAAAATGGCATCAGTGAACTGCCAGATCTAAGCTTGTCTGAGGGAAAATCTGTGATGCAAGCACCAAAATCTAAAAACATACTCAAAAAAGCTGGTTCCAGTGTGAGGCCAAAATCTACAACTCTTGAGAAAGCTATTCAAGATTTGGAGAAAACGGTTGCAGAGTCAAGGCCACCAACTACGGAAAACCAGGAGGTTGATAGTACATCCCAAGCTATCAAAAGGAGATTACCAAGGGAAATAAAGCTAAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCACAGGAGGTTGTTAACCGTCTTATGAGTATTCTTGGGCACCTGATTCAGCTCAGAACACTTAAGAGAAACTTAAAAATCATGATCAATACGGGTTTGTCTGCAAAGAAGGAGAAAGATGATAGGTTTCAACAAAAAAAGAAGGAAGTTGCTGAGATGATAAAGATGCTGCCCCCATCTATTGATTCTGAGCAACTGCAGCAAGCTGGAGCATCTGGTGATCAAGAATTGGGTCCTGATGGAAAAGCAATATCTAAAAGGCTTTTTACTATGGACACTGCATTGGAAGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGATGAAACTGCAGGTCCTCTAATCAGAAAGTTGTATGCTGAGCTAGCAGCACTATGGCCAAATGGTTGCATGGATAACCACGGGATCAAACGGGCAATTTGCAGAGCAAAAGAGAGGCGTAGAGCACTACACAGTAGAAATAAGGATCAGGAAAAAATTAAAAGGAAAAACTTATTGGCACCTCAGCCTGAAAAGAATGTTCAATTTGATGCTAGTCCACAACAGAACATGCGAAAGAGATTAGCTCCAGAATCTAGCAGTCATACTTCACTGAATAAGGCAGTTTCTAATACAGTTACAGATGTCCGGGTTCTCCCCTCCCCTGTGAATGGTCTGAAGAAAGAAAAAGCAAAGACAAGTTCGAGCTGTTCCCCAGATGATGTTAGGGTTGCAGATGGTGTTTTAATTAAAAAGGTAAAAAAGAGAAAGACAGAAGGTGAGTTGGAAGGAACTCATCGTCGCCCTGAGAAGCTGGCTTCTTTGAAGGAAGAAGAAAGGCCTAGGTCCCTAAAGCAGTCAGCAGTTGCTCCCCCCAAATCAAACCTTCAACCAACATCTTTACCCGGTGTTGAACAGTCAAGTTAA 2241 0.4279 MADDNSNPDAAAANDSSKPPSSTCIRIGDRQLFHVELRPGETTIVSWKKLLKDANKTNEGSTSAAPEQVPKANPALEARIAPGQAENNEQDAPQTNRFSAVIEKIERLYMGNDSDDEDLPVVPDDQYDTEDSFIDDAELDEYFEVDDSVIKHDGFFINRGKLERINEPPALPNQPAKKRCRKDILKNPGENIDGRVSNKHVKVGKTAAGKTAPLPVKNTLNSSQNLAVPGEHYADLKSQNQLEVSRTTLKKEPADIRPISDPSASLKVSNNDVSSAVEAKDADKQKTILQSKNRVDKHKDASGVHDTSHQKHQEKKVSVPSKSQLGGVPSSIDDLENTGRSKEKNGISELPDLSLSEGKSVMQAPKSKNILKKAGSSVRPKSTTLEKAIQDLEKTVAESRPPTTENQEVDSTSQAIKRRLPREIKLKLAKVARLAQASQGKVSQEVVNRLMSILGHLIQLRTLKRNLKIMINTGLSAKKEKDDRFQQKKKEVAEMIKMLPPSIDSEQLQQAGASGDQELGPDGKAISKRLFTMDTALEDKICDLYDLFVDGLDETAGPLIRKLYAELAALWPNGCMDNHGIKRAICRAKERRRALHSRNKDQEKIKRKNLLAPQPEKNVQFDASPQQNMRKRLAPESSSHTSLNKAVSNTVTDVRVLPSPVNGLKKEKAKTSSSCSPDDVRVADGVLIKKVKKRKTEGELEGTHRRPEKLASLKEEERPRSLKQSAVAPPKSNLQPTSLPGVEQSS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04604 746 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 11 732 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 319 335 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 55 96 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 619 656 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 726 746 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 253 381 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 595 611 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 683 722 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 277 318 - -
Vivi4g04604 746 Pfam HPC2 and ubinuclein domain 124 163 IPR014840 -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 593 746 - -
Vivi4g04604 746 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04604 Vivi-Chr4 173993092 174005917 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04604 - - psat:127092110 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04604 4 173993092 174005917 Vivi4g04604 4 173993092 174005917 ECH
Vivi4g04604 4 173993092 174005917 Vivi3g03057 3 51720731 51728678 PCT