Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03057 ATGACCGAAGAGAAGAAACCTTCTTCGTCGTTCGTCAAGATTGGTGACCGGCAATTGTTTACGGTGGAGCTCCGGCCGGGAGAGACCACCATAGTGTCGTGGAAGAAGCTCTTGAAGGATGCTGCCAAGTCGAACGGATCGGCTTCCACATCGCAACAGTCCCGGCCGGAGGCTGTTCCGGGGCAACCCGCAGAGGTTGAGGAAAATGATGAAGCTCAGCCACATCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGGAAGGATAGCAGTGACGATGAGGATCTGCCTGATGTGCCTGATGATGATCAGTATGATACTGAAGATTCTTTTATAGATGACGCAGAGCTGGACGAATATTTTCAGGTTGATCATTCCAAAGTCAAACATGATGGATTCTTTGTAAATAGGGGGAAATTGGAACGCACTGATGAACCTCCTGTAATACCCAACCAGCAACCAAAGAAAAGGCGCAGAAAAGATATAGTGAAGAATCCAGGTGAAAATAATAATGACCATGGATCAAACAAACATGTTAAAGTGGGCAAGGCAGCATCTGGGAAAACAACTTTCGTACAGGCAAGGAATGTACCCGATGAACACTATGAAGACTTGAAAATTCATAATCATTCCGATATCTATGGAGTTAGTTCCAAAAAGAAAATTGCTGATACTAAACCCATATTGGTCTCTGCCGTCTCTTTGAAAACTTCAAGTGATGATGTCCCTGCTGCCATGTCAGAAGCCAAAGATGCTGATAAGAAGAAGATAGGAACTTTGCAATCTAAAAACACAAGTGAATCATTTGATGCATCTCATCAGAAGTACCATGAAAAAGGTGCTTATGTACAATCCAAATCCCAGCCTGGAAGAGCCTCGAAGAGTACTGATAATTTAGAAAATAACAGTCGGGTGAAAGAAAAAAATGGTATGCGGCAACTGCCGGATCTTAACCTGACTGTGGGAAAGTGGGCTACTAAAGCAGCAAAATCTGAATACATGCACAGGAAAGATGGGTCTAGTGTTAGGCCAAAATCTTCAATGCTTGAGAAGACTCTTGTCGAGTTAGAGAAAATGGTTGCAGAGTCAAGGCCCCCTGCAGCGGACGTGGAGGCCGATAATTCATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTAAAGCTTGCTAAAGTTGCTAGAATAGCGGCAAGCCATGGAAAAGTATCAAAAGAGTTGATTAACCGCCTTATGAGTATTCTTGGGCACTTAATGCAACTCAGAACATTAAAGAGAAATTTAAAAATAATGATCAATATGGGCCTGTCAGCAAAGCAGGATGATGACGATAGGTTTCAACGAATAAAAAAGGAAGTTGTTGATATGATTAAGATGCAGGCTCCAGCTTCGGAATCCAAGCAACAGCAGAAAGCTGGAGCATCAGGTGATGTTCAAGAATTTGGTCCTGATGGAAAAGCAATAACTAAAAGGAGTCTTGGTATGGACGCCGCTTTGGAGGACAAGATTTGTGATCTCTATGATATTTTTGTTGATGGCTTGGATGAAAATGCAGGTCCACAGATCAGAAAGTTATATGCAGAGCTTGCAGAATTATGGCCAACTGGTTACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCATCGTACACAAAAAATAAGGATCAGGAAAAAATTAAGAGGAAGAAGTTGCTGGCATCAAGGCAAGAGGATAGCGTTCAACTTGATACTGGCTCAATTACATCACAGCAGAACCAACAAGAGAAATTAGCTCCAGAATTAACCAGTCATGCTTTTACTTCAACAAACAAGCCCATATCTAATACGAGCACTGTCCAGGTCCCCATTCACATGAATGGTGTAAAGCCAGAAAAAGCAAAGGGAAGTTCAAGCAGTTCCCTGGATGATGTCCGTGTTGCTGATGGCATTTTGACAAAGAAGCTGAAGAGAAAGCCAGAACTTGAGTTTGAAGGAGCAAATGGTGGGCCTGAGAGGCTGGTTTCTTTGCAGGGAGAAGAAAGGCCCCGGCCCCAGAAGCCGTCTTCTGGTGTTCCCACCAAATCAAATGTTCAGCCGACATCCCTCCCAGGTCTTGAACTGTCAAGCTAA 2145 0.4373 MTEEKKPSSSFVKIGDRQLFTVELRPGETTIVSWKKLLKDAAKSNGSASTSQQSRPEAVPGQPAEVEENDEAQPHRFSAVIEKIERLYMGKDSSDDEDLPDVPDDDQYDTEDSFIDDAELDEYFQVDHSKVKHDGFFVNRGKLERTDEPPVIPNQQPKKRRRKDIVKNPGENNNDHGSNKHVKVGKAASGKTTFVQARNVPDEHYEDLKIHNHSDIYGVSSKKKIADTKPILVSAVSLKTSSDDVPAAMSEAKDADKKKIGTLQSKNTSESFDASHQKYHEKGAYVQSKSQPGRASKSTDNLENNSRVKEKNGMRQLPDLNLTVGKWATKAAKSEYMHRKDGSSVRPKSSMLEKTLVELEKMVAESRPPAADVEADNSSQAVKRRLPREIKLKLAKVARIAASHGKVSKELINRLMSILGHLMQLRTLKRNLKIMINMGLSAKQDDDDRFQRIKKEVVDMIKMQAPASESKQQQKAGASGDVQEFGPDGKAITKRSLGMDAALEDKICDLYDIFVDGLDENAGPQIRKLYAELAELWPTGYMDNHGIKRGICRAKERRRASYTKNKDQEKIKRKKLLASRQEDSVQLDTGSITSQQNQQEKLAPELTSHAFTSTNKPISNTSTVQVPIHMNGVKPEKAKGSSSSSLDDVRVADGILTKKLKRKPELEFEGANGGPERLVSLQGEERPRPQKPSSGVPTKSNVQPTSLPGLELSS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03057 714 MobiDBLite consensus disorder prediction 43 58 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 557 581 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 68 96 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 693 714 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 139 206 - -
Vivi3g03057 714 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 15 689 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 249 263 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 240 315 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 465 487 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 582 603 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 97 112 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 42 112 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 655 714 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 557 603 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 154 182 - -
Vivi3g03057 714 MobiDBLite consensus disorder prediction 655 670 - -
Vivi3g03057 714 Pfam HPC2 and ubinuclein domain 102 144 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03057 Vivi-Chr3 51720731 51728678 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03057 - - tpra:123906274 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03057 3 51720731 51728678 Vivi3g03057 3 51720731 51728678 ECH
Vivi4g04604 4 173993092 174005917 Vivi3g03057 3 51720731 51728678 PCT