Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03279 ATGGTTTCTTTACAAATATTTTCAGCAGCTAGTTTATCTTCTTCTTCTTTGAAGACAGTTAATGCTGCTATCCATCTCCCTAAACTCCCACGTCTCCCTAATTTCTCCATTAATCCACAATTACCAAAAACAACAAAACTGATTGAAGAATTTAATGTATCCATAGATCATACAATTCAACTTGAAAAGAATCATGTTGTCCTCACCAAACAATCACACGACAGACACAACAAGAAGAATACAGATGATATTATTATTAAACTCTATGCAGTCTTGGAAGCGGTTTCCGACAGAGTTGAAATGCATCACAACATTGCCGAACAACGCAACAATTGGAACAATCTTTTATTAAATTCCATCAACATGATTACTCTTGCTGCTACAACTTTGGCTGGTGTTGCTTCTGCTGCTGCAACCACTTGCTCTGATTCTTCACTTTTGGCTTTGAAATTATCTTCTGCTCTTTTATTCTCTGCTGCTACTGGTTTATTGCTTATCATGAACAAAATTAATCCTTCTCAACTCACAGAGGAACAAAGAAATGCTACCAGATTGTTTAAACAGCTTCAAACACAAATCCAAACCACTATTGCAATAGGAAATCCGTGTGAGGATGATGTCAAAGATGCAATGGAGAAGGTTTTGGCTCTTGACAAAGCTTTCCCACTTCCATTATTAGGAGCAATGCTTGAAAAATATCCTGCAAAATTTGAGCCTGCTGTTTGGTGGCCTTCTAAAAAAGGAAAATCACAAAGCAAGAAAATAGGGAAAATGAATAATGGATGGAGTAAAGAATTAGAAATGGAAATGAGGGAAGTTGTTGAAGTCATAAAGAGAAAAGATGCTGAGGATTATGACAGACTCGGAAACATAGCATTGAAGATAAACAAGAGTTTGGCAATTGCAGGTCCATTACTCACAGGCATTGCAGCTATTGGATCTACTTTTATAGGTAATGGTAGTCCTGTGGCTGCTTTTGTTCCTCTCTTGGCTGGTTCGTTGGCTTCTGCAATTAATACTTTTGAGCATGGTGGACAAGTTGGCATGGTTTTTGAAATGTATAGAGGGTCTGCTGGTTTCTTCAACTTGTTAGAAACCTCCATTGAATCAACATTGGGAGAGAAAGATTTAGAGAAAAGAGAAAATGGAGAGTTGTTTGAAATGAAGATGGCTTTGCAGTTGGGAAGAAGTGTATCAAATCTGAGGGAACTTGCCTCAAAATCAGCTTCCAATCTCATAGATGAATTTGCCAGCAAGCTCTTCTAA 1266 0.376 MVSLQIFSAASLSSSSLKTVNAAIHLPKLPRLPNFSINPQLPKTTKLIEEFNVSIDHTIQLEKNHVVLTKQSHDRHNKKNTDDIIIKLYAVLEAVSDRVEMHHNIAEQRNNWNNLLLNSINMITLAATTLAGVASAAATTCSDSSLLALKLSSALLFSAATGLLLIMNKINPSQLTEEQRNATRLFKQLQTQIQTTIAIGNPCEDDVKDAMEKVLALDKAFPLPLLGAMLEKYPAKFEPAVWWPSKKGKSQSKKIGKMNNGWSKELEMEMREVVEVIKRKDAEDYDRLGNIALKINKSLAIAGPLLTGIAAIGSTFIGNGSPVAAFVPLLAGSLASAINTFEHGGQVGMVFEMYRGSAGFFNLLETSIESTLGEKDLEKRENGELFEMKMALQLGRSVSNLRELASKSASNLIDEFASKLF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03279 421 Coils Coil 263 283 - -
Vivi4g03279 421 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 4 421 IPR027949 -
Vivi4g03279 421 Pfam Petal formation-expressed 87 402 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03279 Vivi-Chr4 147311424 147312752 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03279 - - vvo:131598037 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03279 4 147311424 147312752 Vivi4g03279 4 147311424 147312752 ECH
Vivi1g00222 1 4375953 4377292 Vivi4g03279 4 147311424 147312752 PCT