Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00222 ATGGCTTTGGCTTTGGCCTCCATACATACCTCAACATCATTCTTTTCTTCATCTTCTGTTCCTTTAAGAAGATCAGTAAATGCTTCAATTCGTGTCCCAAAAACCAATAATTTCTCAGTTCCTAAAATACCTACTAAGAACAATGTTGAAGGATTAACAATTCCATTGTTAAATGGTCAAAAAAATGTTTTGTCCAATTATGATATCACCATGCAACTCTATGCTATCTTAGATTCTGTATCCGACAGAATAGAAATGCACAACAACCTCAGCCAACAACGTCAGAATTGGAACAACCTACTTCTAAACAACATCAACATGATCACACTCACTGCTACAACGTTAACCGGTGTAGCCGCGGCAAGCGGTGCTATCGGAGCACCTCTTCTGGCTCTTAAACTATCATCCACTCTTTTGTTTTCAGCAGCAACAGGTTTGCTTCTAATCATGAACAAGATTCAGCCTTCGCAACTCGCCGAGGAACAACGAAACGCTACGAGGTTGTTTAAACAGCTTAGGGCTAAAATCGAAACCGGGATTTCTCTTGGAAATCTAACGGAACATGATGTGAGGTGTTTGGTGGAGAATGTTTTGGCTCTTGATAAAGCTTATCCTCTTCCTTTATTAGGTGTTATGCTTGAAAAGTTTCCGGAGAAATATGAACCTGCTGTTTGGTGGCCGAGAAAAAGAAAAGAAGGAAATACAGCAGAAAGAAAGATGAAGAAGAGAAATAGTAATAATAATAATAATAATGGATGGAGTGAAGAACTTGAAATGGAATTGAAAGAAGTTATTGAAGTTGTGAAGAGGAAAGACATTGAAGATTATGAGAGACTTGGAAATATGATATTGAAGGTTAACAAGAGTTTAGGAATAGCAGGTCCATTACTCACTGGAATTGCAGCTATAGGTTCTGCATGTGTAGGAAACAGTTCAATTGCAGCTATAGTTGCTGTCATGGCTGGTTCATTAGGTGCTGTAGTGAATGCTATTGAACATGGTGGACAAATAGGTATGGTGTTTGAAATGTATAGAAACTGTGGTGGATTCTTCAAGCTGTTGGAAGAAAGTGTTGATGATACGTTGGAAGAGAAAGATTATGAGATGAGAGAAAATGGAGAGTTGTTTGAAATGAAAATGGCTTTGATGTTGGGAAGAAGTGTTTGTGAGATGAGACAACTTGCTTTGAAATCTGTTGCTTGTAGAATGGAAGGAATTGAGGTTGATGAATTTGCTAGCAAGTTGTTTTGA 1251 0.3813 MALALASIHTSTSFFSSSSVPLRRSVNASIRVPKTNNFSVPKIPTKNNVEGLTIPLLNGQKNVLSNYDITMQLYAILDSVSDRIEMHNNLSQQRQNWNNLLLNNINMITLTATTLTGVAAASGAIGAPLLALKLSSTLLFSAATGLLLIMNKIQPSQLAEEQRNATRLFKQLRAKIETGISLGNLTEHDVRCLVENVLALDKAYPLPLLGVMLEKFPEKYEPAVWWPRKRKEGNTAERKMKKRNSNNNNNNGWSEELEMELKEVIEVVKRKDIEDYERLGNMILKVNKSLGIAGPLLTGIAAIGSACVGNSSIAAIVAVMAGSLGAVVNAIEHGGQIGMVFEMYRNCGGFFKLLEESVDDTLEEKDYEMRENGELFEMKMALMLGRSVCEMRQLALKSVACRMEGIEVDEFASKLF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00222 416 Coils Coil 254 274 - -
Vivi1g00222 416 Pfam Petal formation-expressed 72 392 IPR027949 -
Vivi1g00222 416 MobiDBLite consensus disorder prediction 232 253 - -
Vivi1g00222 416 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 16 416 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00222 Vivi-Chr1 4375953 4377292 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00222 - - cave:132170116 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00222 1 4375953 4377292 Vivi1g00222 1 4375953 4377292 ECH
Vivi1g00222 1 4375953 4377292 Vivi4g03279 4 147311424 147312752 PCT