Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03277 ATGGTTTCACTACAAATATTTTCAGCAGCTAATTTATCTTCTTCTTTGAAGACAGTTAATGCTGCTATTCATCTCCCTAAACTCCCTCGTGTATTCTCAATCCCACAACTACCAAAAACAAAGCCTCTTATTGAGGACTTTAATGTATCCATTCATCATATTAATACAAATCAATTTCAAAACAATAATATTGTCCTCACCTCACAATCACACGACAGGAATACAGATGATATTATTATTAAACTTTATGCAGTCTTGGAAGCTGTTTCCGACAGAGTTGAAATGCATCACAATATTGCCCAACAACGTAACAATTGGAACAATCTTTTATTAAATTCCATCAACATGATTACTCTTACTGCTACAACTTTGGCTGCTGTTGCTTCTGCTGCTGCAACCACTTGCTCTGATTCTTCACTTTTGGCTTTGAAACTATCTTCTGCTCTTTTATTCTCTGCTGCAACCGGAATCTTACTTATCATGAACAAAATTAACCCTTCTCAACTCACAGAGGAACAAAGAAATGCTACAAGATTGTTTAGACAGCTTCAGACACAAATCCAAACCACTATTGCAATAGGAAATCCTAGTGAGGAAGATGTCAAAGATGCAATGGAGAAGGTTTTGGCACTTGACAAAGCTTACCCACTTCCCTTATTAGGAGCAATGCTTGAAAAATATCCTGCAAAATTTGAGCCTGCTGTTTGGTGGCCTTCTAAAAAAGGAAAATCACAAAGAAAGAAAATTGGGAAAATGAATAATGGATGGAGTGAAGAATTAGAAATGGAAATGAGGGAGGTTGTTGAAGTGATAAAGAAAAAAGATGCTGAAGATTATAACAGACTGGGAAATATAGCTTTGAAGATAAACAAGAGCTTGGCAATTGCTGGGCCATTACTCACAGGAATTGCAGCTATTGGATCTACTTTTATAGGTAATGGTAATTCTTTGGCTGCTTTTGTTCCTCTCTTGGCTGGTTCATTGGCTTCTGCGATTAATACTTTTGAACATGGTGGCCAAGTTGGCATGGTTTTTGAAATGTATAGAGGCTCTGCTGGATTCTTCAACTTATTAGAAACCTCAATTGAATCAAATTTAAGTGAGAAAGATTTAGAGAGAAGAGAAAATGGAGTATTGTTTGAAATGAAGATGGCTTTGAAGTTGGGAAGAAGTATATCAAATCTGAGGGAACTTGCATCAAAATCAGCTTCATATAGAATGGAAGGTGTTGGTGACATGGATGAATTTGCCAGCAAGCTTTTCTAA 1266 0.3649 MVSLQIFSAANLSSSLKTVNAAIHLPKLPRVFSIPQLPKTKPLIEDFNVSIHHINTNQFQNNNIVLTSQSHDRNTDDIIIKLYAVLEAVSDRVEMHHNIAQQRNNWNNLLLNSINMITLTATTLAAVASAAATTCSDSSLLALKLSSALLFSAATGILLIMNKINPSQLTEEQRNATRLFRQLQTQIQTTIAIGNPSEEDVKDAMEKVLALDKAYPLPLLGAMLEKYPAKFEPAVWWPSKKGKSQRKKIGKMNNGWSEELEMEMREVVEVIKKKDAEDYNRLGNIALKINKSLAIAGPLLTGIAAIGSTFIGNGNSLAAFVPLLAGSLASAINTFEHGGQVGMVFEMYRGSAGFFNLLETSIESNLSEKDLERRENGVLFEMKMALKLGRSISNLRELASKSASYRMEGVGDMDEFASKLF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03277 421 Coils Coil 257 277 - -
Vivi4g03277 421 Pfam Petal formation-expressed 81 396 IPR027949 -
Vivi4g03277 421 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 4 421 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03277 Vivi-Chr4 147285687 147287157 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03277 - - vvo:131598037 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03277 4 147285687 147287157 Vivi4g03277 4 147285687 147287157 ECH
Vivi1g00219 1 4274510 4292802 Vivi4g03277 4 147285687 147287157 PCT