Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00219 ATGGCTTCCATGCGCACCTCAACAATATTTTCACCTTCATTCTCCTTACTTTCTTCAAAGAGAGTAAATGTAAATTCCTTAATCCGTGTCCCAAGACTCAATTCTGCACATCCTAAGACTAATATACTCACTGGATCAAAGCAGATGGAAGGGTTAAGTACATTCACAGACTCAATTCCTTTATTATTACATGAAAAAATTGATTTGTCCAGTTCTGCAATCTCTAACACCACCACCATGCAACTCTATGCTATCTTAGAAGCTGTATCCGACAGATACGAAATGCACAGAAACGTAGGCGAACAGCGTCAGAATTGGAATGACCTACTTCTAAACAATATCAACATGATTACACTCGCTGCTACAACATTAACCGGTGTTGCAGCTGCAAGTGGTGCGGTTGGTGCACACCTTTTGGCTCTTAAACTATCATCCACTCTTCTGTTTTCTGCGGCAACTTGCATGCTACTTGTCATGAACAAGATTCAGCCTTCACAACTTGCCGAGGAACAAAGAAATGCTACAAGATTGTTTAAACAGCTTTTGACTCAAATCCAAACCAAAATCAGTGTTGGTAGTCTTATTACCGAGGAAGATGTGGAGTTTTCAATGGAGAAACTGTTGGCACTTGACAAAGCTTATCCACTTCCTTTGTTAGGAGGAGCTATGCTTGAAAAGTTTCCTTCAAAATATGAAGCTGCTGTTTGGTGGCCTGAGAAAAGAAGAGAGGAAAATGCAGCAGCAAGAAAAATGACCAAGAGGACTAGTAATAGTAGTAATGGATGGAGTGAAGAACTAGAAACTGAACTGAGGGAAGTTATTGAAGTTATGAAGAGAAGAGACATAGGGAATTATGAGAGACTTGGAAATATATTATTGAAGGTTAACAAGAGTTTGGCAATAGCAGGTCCATTACTCACTGGAATTGCAGCTATAGGTTCTGCATTTGTAGGAAATGGTGATGGGTTGTTTTCAGCCATGGTTCCTTTGATGGCAGGGTCAATGGCTTGTGCAATAAATGGTTTAGAGCATGGTGGACAAGTTGGTATGGTGTTTGAAATGTACAGAAGCTGTGGTGGATTTTTCAGGATGTTGGAAGAGAGTGTTGAAAGCACACTTGAAGAGAATGATTTGGAGAAAAGAGAAAATGGTGAGGTATTTGAAATGAAGATAGCAATGATGTTGGGAAGAAGTGTTTCCCAACTAAGACAAGTTGCTTCAAAATCTGCTTCTGGTTGTATGGAAGGGATTGCTACAGACGAATTTGCTAGCAAGCTTTTCTAG 1284 0.3995 MASMRTSTIFSPSFSLLSSKRVNVNSLIRVPRLNSAHPKTNILTGSKQMEGLSTFTDSIPLLLHEKIDLSSSAISNTTTMQLYAILEAVSDRYEMHRNVGEQRQNWNDLLLNNINMITLAATTLTGVAAASGAVGAHLLALKLSSTLLFSAATCMLLVMNKIQPSQLAEEQRNATRLFKQLLTQIQTKISVGSLITEEDVEFSMEKLLALDKAYPLPLLGGAMLEKFPSKYEAAVWWPEKRREENAAARKMTKRTSNSSNGWSEELETELREVIEVMKRRDIGNYERLGNILLKVNKSLAIAGPLLTGIAAIGSAFVGNGDGLFSAMVPLMAGSMACAINGLEHGGQVGMVFEMYRSCGGFFRMLEESVESTLEENDLEKRENGEVFEMKIAMMLGRSVSQLRQVASKSASGCMEGIATDEFASKLF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00219 427 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 15 427 IPR027949 -
Vivi1g00219 427 Pfam Petal formation-expressed 81 403 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00219 Vivi-Chr1 4274510 4292802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00219 - - gmx:100808550 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00219 1 4274510 4292802 Vivi1g00219 1 4274510 4292802 ECH
Vivi1g00219 1 4274510 4292802 Vivi4g03277 4 147285687 147287157 PCT