Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02707 ATGGGTGTGACGACTAGCAACCGCAAACGCTCTGAAGAATGCATGTCCGTCAACCACAATCTCAATCTCAATCACACAATCTCTTCTTCATCTTCAGATTACCGCAGGAAGCGACTCAAATTCTCCTCCGAAACAACGCGAATCGTTTCGACCTCATACGCCGTCGTTTCGAGGATTTCTCGGTACCCGGATATCAAGCCTCCGTTTGTCCGTGAAGTTCACGCGCCGTGCAGGCCTAAAAAATTCGACCTTGCCAGAAAGGTATCGAGCTTCGGCGCCGGAGAAGATATCATGGGGAATTTCCTGGTGAGGAATTATGAAAAGGCGAAGCGTGTTGCGTTGGAGGAATGTAGGTTGGTGTCTCAGAGGGAGAAGGTGGTGATTGATTTGGATGAAGAGAGTGGCGGGAGGGAGGTTTTAGATGATTCTGATATGATGGAAGTGATTCAAGTTGATGATTCCAAGGCTAAGGTTGATGGTTTGGAGGGTAAGGGTAAGGTGGTTGAAATTGGTGTTCAGCGGAGGTTAGCATCGTCGCCGGATTCGGCTTTGACTAATGCTATTGTGAACTTGGAGGAGCATGATCTTTCGAGTGTTCAGGTTTATAAGAAGTTGCTTGAGGGTGTTCAGAGAAGAACGGACACGATTCAGAGTCTGAATTTTCAAATTGAGCTGAATGAGAAGCGTAGGGAGACGTTTCAGTTGTTGCGTCCTAAGAAGGAATTGGTTGAGGAAGTTCCGTTTGAGCCCTTTATCCCTCTAACGGATGATGAAGAACATGAGGTTTCTCGTGCGTTTTCGTCCAACCGGAAGAAGATATTGGTTGCTCACGAGAGTTCTAATATTGAGTTATCGGGAGAAAAGATTCGGTGCCTTCTCCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGCGGAGAGAACCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATGGATATGATTACAAATCTGTCAGAAGATGGACGAGTCAAAGGAAATTGGGATACAACCTATTTGATTGTGATAAAATATTTGTGCCCATCCATCAAGAAATCCACTGGTGCCTGGCGGTTATCAATAAAAAAGATGCAAAATTCCAGTATCTTGACTCGTTGAAAGGAAAAGATAACCGTGTGCTAAAAGTGCTGGCTAGATACTTGGTAGATGAAGTAAGGGACAAAACTGGGAAAGATATTGATGTAAGCACATGGGAGAAAGAGTTTGTGGATGACCTTCCTGAGCAGGAAAATGGGTTTGATTGCGGTGTATTTATGATCAAATATGCTGACTTTTATAGCAGAGGCTTGGGGCTATGTTTTAATCAGGAACACATGTCTTACTTTCGGCGCAGGACAGCTAAAGAGGTATTGAGATTGAGAGCGGACTAA 1455 0.4405 MGVTTSNRKRSEECMSVNHNLNLNHTISSSSSDYRRKRLKFSSETTRIVSTSYAVVSRISRYPDIKPPFVREVHAPCRPKKFDLARKVSSFGAGEDIMGNFLVRNYEKAKRVALEECRLVSQREKVVIDLDEESGGREVLDDSDMMEVIQVDDSKAKVDGLEGKGKVVEIGVQRRLASSPDSALTNAIVNLEEHDLSSVQVYKKLLEGVQRRTDTIQSLNFQIELNEKRRETFQLLRPKKELVEEVPFEPFIPLTDDEEHEVSRAFSSNRKKILVAHESSNIELSGEKIRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFNTFFYKKLISGRDGYDYKSVRRWTSQRKLGYNLFDCDKIFVPIHQEIHWCLAVINKKDAKFQYLDSLKGKDNRVLKVLARYLVDEVRDKTGKDIDVSTWEKEFVDDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMSYFRRRTAKEVLRLRAD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02707 484 Gene3D Adenoviral Proteinase; Chain A 251 482 - -
Vivi4g02707 484 ProSiteProfiles Ubiquitin-like protease family profile. 282 454 IPR003653 GO:0006508|GO:0008234
Vivi4g02707 484 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 88 477 - -
Vivi4g02707 484 SUPERFAMILY Cysteine proteinases 250 482 IPR038765 -
Vivi4g02707 484 Pfam Ulp1 protease family, C-terminal catalytic domain 297 477 IPR003653 GO:0006508|GO:0008234
Vivi4g02707 484 FunFam Ubiquitin-like-specific protease ESD4 241 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02707 Vivi-Chr4 129119877 129126371 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02707 K08592 - mnt:21406275 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01153 1 24316697 24325329 Vivi4g02707 4 129119877 129126371 PCT