Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02692 ATGGATGCAAAAGCTAAATCTTGTGTGGAACCTTTGAAGTACCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGAAAGAAAGTAAAGAAAGTTTTGAAGCGCATTGATGGTGTTTTCACTGCAACCATCGATTCACAACAGCATAAAGTAACAGTTACCGGAAATGTTAGTGTTGAGACGCTTTTAAGGAAGTTGGTCAGAGCTGGAAAACCCGCCGAGATTTGGCCGGAGAATGTCGACGGTAAGGGGAAAAACTCCGGCAAAGAGAAGAAGAAGAAGAATGAGAATGAAAATGAAGCAAAAGAAACACAAAGCTTGCAAAACAAGGGAACTGAAAGTGAAAGCAAAAACAAGAACAAAAACTCAAAAGCCAGTGCCGGTGAGTCGCCGGTAAAGTCTCCGGCGAACAGCAACGTTGCTCCGGGAGGTGATGGAGGGGGTTCTGATAGTAATAAGAAGAAGAAAAAGAAAGATGGGTGTGGTGGAAATGGAAATGGAAACAATGGTTTGAGCACAGTAGCTAAGAGTGGACCATCACACACTGGATTCCAATTTCAGAATCTTGATCAAGGTATGGCTCACCAAGTGAATCTCAGCCCTACACGTCAGCAATCATTTTTCTATCCATCAGAAACATGTTACCCTCCCATGGCTTATGTGTCATCAGCTTACAATATGTTATATCCTATGGGAAGAGGTTGTGATCCTTCTTATTATGTTCCATCTCTACCCTACACGTGTCCTCCTAGCCTTGTTGATTGA 774 0.4264 MDAKAKSCVEPLKYQTWFLKVSIHCEGCRKKVKKVLKRIDGVFTATIDSQQHKVTVTGNVSVETLLRKLVRAGKPAEIWPENVDGKGKNSGKEKKKKNENENEAKETQSLQNKGTESESKNKNKNSKASAGESPVKSPANSNVAPGGDGGGSDSNKKKKKKDGCGGNGNGNNGLSTVAKSGPSHTGFQFQNLDQGMAHQVNLSPTRQQSFFYPSETCYPPMAYVSSAYNMLYPMGRGCDPSYYVPSLPYTCPPSLVD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02692 257 Coils Coil 93 113 - -
Vivi4g02692 257 MobiDBLite consensus disorder prediction 126 140 - -
Vivi4g02692 257 Gene3D - 13 78 - -
Vivi4g02692 257 SUPERFAMILY HMA, heavy metal-associated domain 13 80 IPR036163 GO:0046872
Vivi4g02692 257 MobiDBLite consensus disorder prediction 168 189 - -
Vivi4g02692 257 MobiDBLite consensus disorder prediction 79 189 - -
Vivi4g02692 257 FunFam Copper transport protein ATOX1 13 81 - -
Vivi4g02692 257 ProSiteProfiles Heavy-metal-associated domain profile. 14 77 IPR006121 GO:0046872
Vivi4g02692 257 CDD HMA 19 77 IPR006121 GO:0046872
Vivi4g02692 257 MobiDBLite consensus disorder prediction 86 106 - -
Vivi4g02692 257 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 11 245 - -
Vivi4g02692 257 Pfam Heavy-metal-associated domain 21 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02692 Vivi-Chr4 128567552 128569144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02692 - - psat:127115794 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02692 4 128567552 128569144 Vivi4g02692 4 128567552 128569144 ECH
Vivi1g01170 1 24461246 24463148 Vivi4g02692 4 128567552 128569144 PCT