Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01170 ATGGATGCTGCTACCTCACAACCATTGAAGTATCAGACATGGCTTTTGAAAGTTTCTATCCATTGTGAAGGTTGCAAAAGAAAAGTAAAGAAAGTTCTACAAAACATTGATGGAGTATTTACTACAACAATTGATCCGCAACAGCAAAAGGTAACAGTCACAGGAAATGTTGCTGTTGAGACTCTGATAAGAAAACTGGCCAAAGCTGGAAAACATGCTGAGGTTTTGCCGGTGAATCTTCCTGCAAAAGGTAAAGATTCCAACAAAGGTAACAACAGTAACAAGAGTGAACAAAGAGACAAAGAACAAAAGAAAAACAACTCTTCAGAAAATAGTACTGAATCCAACCATAGTTCTTCTGTCAAAGACAAAGTAGTTGAAAATGCTGAAAAATGCATGGGTGAAAAAAACAGTAATAAGACAAAAACTAAGGTGTCGCCGGAAAAGTCGCCGGGAAAGTCTCCGTCCAAGTCTCCGGCCAGTTGTAAGAAACCGGAGAAGGACAACAAGGCTGGAGGTGATTCTGGGAAGAAGAAGATGAAGAAAGTTGGTGAAACTGGAACTAAAACAAGAAACAATGGGTTGAGTTCAGCATCTAATGGTGGACCTGCACACACTGGATCAGGATTCCATAGTCCAGGTAAGGTTGTGGGGCAAGTGAATCTCAGCCCTACACGTCAGCAGCAACCGTACATGATGTACCCAGAAACGTGTTATCCTCCTTTGGTACAACAATATGCAGCATACAACAGATTATGTCCCATGGGAACAATGGATTGTCCTTCTTACTATGTTCCACCATTGCCCTACATGTGTTCAGGCCTTGATCGTGACTCTTATCAGTTTCAATCTGGACCGTTGATTCCCTTTGAATTGTTCAGTGATGAAAATGCAAATGGGTGTTTTATCATGTGA 915 0.412 MDAATSQPLKYQTWLLKVSIHCEGCKRKVKKVLQNIDGVFTTTIDPQQQKVTVTGNVAVETLIRKLAKAGKHAEVLPVNLPAKGKDSNKGNNSNKSEQRDKEQKKNNSSENSTESNHSSSVKDKVVENAEKCMGEKNSNKTKTKVSPEKSPGKSPSKSPASCKKPEKDNKAGGDSGKKKMKKVGETGTKTRNNGLSSASNGGPAHTGSGFHSPGKVVGQVNLSPTRQQQPYMMYPETCYPPLVQQYAAYNRLCPMGTMDCPSYYVPPLPYMCSGLDRDSYQFQSGPLIPFELFSDENANGCFIM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01170 304 CDD HMA 16 74 IPR006121 GO:0046872
Vivi1g01170 304 MobiDBLite consensus disorder prediction 90 108 - -
Vivi1g01170 304 MobiDBLite consensus disorder prediction 160 186 - -
Vivi1g01170 304 MobiDBLite consensus disorder prediction 77 218 - -
Vivi1g01170 304 MobiDBLite consensus disorder prediction 120 147 - -
Vivi1g01170 304 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 304 - -
Vivi1g01170 304 MobiDBLite consensus disorder prediction 187 206 - -
Vivi1g01170 304 ProSiteProfiles Heavy-metal-associated domain profile. 11 74 IPR006121 GO:0046872
Vivi1g01170 304 FunFam Copper transport protein ATOX1 10 79 - -
Vivi1g01170 304 Pfam Heavy-metal-associated domain 18 72 IPR006121 GO:0046872
Vivi1g01170 304 SUPERFAMILY HMA, heavy metal-associated domain 10 76 IPR036163 GO:0046872
Vivi1g01170 304 Gene3D - 10 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01170 Vivi-Chr1 24461246 24463148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01170 - - tpra:123882121 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01170 1 24461246 24463148 Vivi4g02692 4 128567552 128569144 PCT