Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g02683 | ATGACCATGGAATACAGAACCCTAGAACTCAACATAATTTCTGCAAAAGATCTCAAAGATGTTAATCTCTTCTCCAAGATGGACGTATACGCTGTCGTTTCAATCACCGGCGATCCTCTCAACCCACAAACCGCCACTACCCACATCCACCGTAACGGCGGAACAAACCCTACCTGGAATTTCCCTGTCAAATTCACCGTCAATGATTCTCTCGCTAATCAGAATCGTCTATCTATTGAAATCAAACTCATCTCCGATCGTAAGGTTGCCGGAGATACCGTGATCGGTACGGTTCATATGCCGCTCAAGGAGCTTCTTGATAACCCTTCCGGAGATTCTTTAAGGCAGGTTAGTTATCAGGTTAGGACAAGCTCAGGGAAATCGAAGGGGACGTTGAATCTCTCCTACAAATTTGGCGAACATGTCGGAGCTCCGGCGATTAAGTCGGAGGTGAAAAGTGAAAAGGTGAAAGGGAAACATGAATCGGAACCAGTGATGGCTTATCCTCCACCTGGAGTGGCGGCAGGGTCTAGTTCTGTTCCGTATGGCACACCCTATCCTCCACCGCCACAAACTGCTGGATATGGATATCCACCACCGGCAGCAGCAGCAGCTTACGGTGGATATCCACCTGCTCAACAGGGTTATGGATATCCACCACCACAACAGGGTTACGGATATCCACCGCAACAACAACCGGGTTACGGGTACCCACCGCAACAACAACCGGGTTATGGATATGCAGGGGCACAGAAGCCAAAGAAGAATAAATTTGGGATGGGTTTGGGAGCAGGGTTGCTTGGAGGTGCATTAGGAGGGATGTTGATTGGTGATATGGTTTCTGATGCTGGTGCTTATGATGCTGGATATGATGATGGCTTTGATGCTGGTGGTTTTGATGGTGGTTTTGATTTTTAA | 918 | 0.4804 | MTMEYRTLELNIISAKDLKDVNLFSKMDVYAVVSITGDPLNPQTATTHIHRNGGTNPTWNFPVKFTVNDSLANQNRLSIEIKLISDRKVAGDTVIGTVHMPLKELLDNPSGDSLRQVSYQVRTSSGKSKGTLNLSYKFGEHVGAPAIKSEVKSEKVKGKHESEPVMAYPPPGVAAGSSSVPYGTPYPPPPQTAGYGYPPPAAAAAYGGYPPAQQGYGYPPPQQGYGYPPQQQPGYGYPPQQQPGYGYAGAQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDAGAYDAGYDDGFDAGGFDGGFDF | 305 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g02683 | 305 | Gene3D | C2 domain | 3 | 166 | IPR035892 | - | |
| Vivi4g02683 | 305 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 141 | IPR035892 | - | |
| Vivi4g02683 | 305 | ProSiteProfiles | C2 domain profile. | 1 | 115 | IPR000008 | - | |
| Vivi4g02683 | 305 | PANTHER | INGRESSION PROTEIN FIC1 | 3 | 278 | - | - | |
| Vivi4g02683 | 305 | SMART | C2_3c | 7 | 114 | IPR000008 | - | |
| Vivi4g02683 | 305 | MobiDBLite | consensus disorder prediction | 213 | 241 | - | - | |
| Vivi4g02683 | 305 | CDD | C2_SRC2_like | 7 | 134 | IPR044750 | GO:0006952 | |
| Vivi4g02683 | 305 | Pfam | C2 domain | 7 | 109 | IPR000008 | - | |
| Vivi4g02683 | 305 | MobiDBLite | consensus disorder prediction | 214 | 236 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi4g02683 | Vivi-Chr4 | 128283473 | 128284610 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g02683 | - | - | mtr:25488140 | 300.827 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi4g02683 | 4 | 128283473 | 128284610 | Vivi4g02683 | 4 | 128283473 | 128284610 | ECH | |
| Vivi1g01173 | 1 | 24526941 | 24528313 | Vivi4g02683 | 4 | 128283473 | 128284610 | PCT |