Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g01173 | ATGGAATACAAAACCTTGCAACTCAATCTCGCATCAGCGAAAGATCTCAACAACGTTAACCTCCTCTCCAGAATGCAAGTATACGCCGTCGTTTCAATCTCCGGCGACCCGGCCAATAAACAAAAGACTAAAACACCCCTTGACAGAGAAGGAGGTACTAACCCTGCTTGGAGTTTCTCAGCTAAACTCAGTTTCAATGAATTGCTAGCTCGCCAGAATCGTTTGACTCTCGAAATCAACCTTCGCTGTTCGGGGAGCCTCGCCGTCGATAAAGATGTTGGTAGCGTCCAAGTTCCTCTAACTGAGCTTCTCAAGCAAACTGGTGATGGAAAAAACTTCGAACATGTTAGTTACCAAGTTAGAAAACCGAATGGAAAACCAAAAGGTTCGTTTAATTTTTCCTACAAAATCAATGAGTCTGTGAACCATAATCATAAGGTGGAGCTGGAACCTGTTATGGTTACCGGTTATCCTTCTCCGGCGATGGGGTCTAATTCGGCACCTTACCCTATTGTGTATCCTCCTCCTCCTCCGACTCAGCCGCAATATCCGGACGGATATACGTATCCATCGCCTTCACCGTTGTACGGTGAGCATCAACAAACTCCGGTGGATTACTTTTACCCGACACAAAATGGCTATGTGTACCCGCCTCCACATGGAGTACCGGTTGCAAAGAGTTACTTTTAA | 690 | 0.458 | MEYKTLQLNLASAKDLNNVNLLSRMQVYAVVSISGDPANKQKTKTPLDREGGTNPAWSFSAKLSFNELLARQNRLTLEINLRCSGSLAVDKDVGSVQVPLTELLKQTGDGKNFEHVSYQVRKPNGKPKGSFNFSYKINESVNHNHKVELEPVMVTGYPSPAMGSNSAPYPIVYPPPPPTQPQYPDGYTYPSPSPLYGEHQQTPVDYFYPTQNGYVYPPPHGVPVAKSYF | 229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g01173 | 229 | Gene3D | C2 domain | 4 | 137 | IPR035892 | - | |
| Vivi1g01173 | 229 | SMART | C2_3c | 5 | 112 | IPR000008 | - | |
| Vivi1g01173 | 229 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 139 | IPR035892 | - | |
| Vivi1g01173 | 229 | Pfam | C2 domain | 5 | 111 | IPR000008 | - | |
| Vivi1g01173 | 229 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 181 | - | - | |
| Vivi1g01173 | 229 | CDD | C2_SRC2_like | 5 | 133 | IPR044750 | GO:0006952 | |
| Vivi1g01173 | 229 | ProSiteProfiles | C2 domain profile. | 1 | 115 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi1g01173 | Vivi-Chr1 | 24526941 | 24528313 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g01173 | - | - | vvo:131602980 | 435.647 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi1g01173 | 1 | 24526941 | 24528313 | Vivi1g01173 | 1 | 24526941 | 24528313 | ECH | |
| Vivi1g01173 | 1 | 24526941 | 24528313 | Vivi4g02683 | 4 | 128283473 | 128284610 | PCT |