Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02427 ATGGGATGTTCACAATCTAAGCTGGATGATGAAGAGTCAGTTCAGCTTTGTAAAGATAGGAAGAAGTTCATTAAACAAGCTGTTGAGCAAAGGACTCGGTTCGCGACCGGTCATATAGCTTATGTTGAATCTATGAAAAGGGTTTCGGCTGCTCTTCGTGATTATATTGAAGGTGATGAGCCTCGCGAGTTTTCGTTAGATTCGGTTGTTACGCCGCCTTTTACGCCGGTGAAGAAGAAAACTAACCCTAGGATTGCCAATGGCAATGGTAATGGCAACCCTAGGATTGCCAATGGCAATGGCAATGGTAATGGAAATGGTAATGGCAATGGCTTTGTTCCTATATCGGCTAAATCTTTCGCGCCATCTTCGATTGAATTTGGAGTTGGACCGAATTCGTTCACGCCATCGCCGATTGAATATGGAGTTGGGCCGAATTCGACTTTGAGAATGAATTACTTTAGGCCAGGTGGTAATCCGGCGGTTTTAGTTGAGGAAAGGCCTCCATCGCCTGAAATCGTCCGAATGGAAGCGTATGCTCCAATGCAGCATTATGGTGTTGATGGTTATTTTGCAATGCAGTCATCACCACCAATGAATCCGTCGATTTTTCCTTATTCTCCTCCGAATGTTAGGCCTAATATACCTCCGCCTTCACCGCAAAATGCTCAGTGGGATTTCTTTTGGAACCCTTTTTCCTCGTTGGATTACTATGGTTATCCGAACCGAAGCAGCCACGATCAAAACGGTATGGATGATGAATACAGAGGACTAAGGCAGGTTCGAGAAGAAGAGGGAATACCGGACCTTGAAGAAGATGAAACTGAACATGAAGATTATGTTGTGAAGAGAAATGTAGTAGAAGAAAGACCTAGAAATGATATAAATACAAACCCCTCCAAAGAAGAAGTCCTAGTTGAAGATCTCGACGAAGATGACGAGGATGATGACGATGATGGAGAGGAGGAAGAGGAGGATGATGAAGTCGGAACAGATGACGAAACCGAAATCGAAACTGAAACTGAGCATGATGCTAAAGATTCACAACAAGCTCATGGAAACGCGAGTTTTGAAGTATCGAAAAATCAAGCTGCGGGTCATATTGAATCCAGCCGTAGAGAAATGGAAATTGGGAAACAAGAGCCTAAGGAAGAAATGGCAGGTTTTACTGTTTATGTAAACCGAAGACCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAGCTCAATTCAAAACTGTGTGCAATGCAGCCAATGATGTCTCAGTTTTGTTAGAGGCGAAGAAAGCTCAGTATTTGCTAACGTCTAATGAACACTCAGCATCGAAATTATTGAATCCGGTCGCTTTGTTCCGGTCAGCTTCTTCGCGCTCTTCTTCATCAAGATTTTTAGTGAATTCTTCAACCACTAGAGAGGAAAGATGTGAGGGCGGTAAGGATATCTCAAAGGAACATTGTAGGCTTTCTGGTAGTCACCAATCTACATTGGACAAGTTAAATGAATGGGAGAAGAAGCTCTACGAGGAAGTCAAGTGTGGAGAGCGAGTCCGAATCGCGTATGAGAAAAAATGCAAGCAACTAAGCAACTATGAAGTAAAAGGAGAGGATCCTTCTGCAGATAAAACAAGAGCAACCATTAGAGATCTAGACACTCAAATAACAGTTTCAATACACTCAGTTGAAGCTATTTCTAGGAGAATCGAAACTCTAAGGGACGAAGAGTTGCATCCTCAACTTCTCGAATTGGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGAGAACCTTAGACGAAGCAAAGATTCTTCTAGCCGGCACCCCTTCTAAATCGCATTCCAGAAGACAACAACAGCCTTCCATCTCAATGACCGATCCAAATAGGCTCGCCCGATCAGCCTCAATTCTCGAAACCGAGTTACGAAACTGGCGAAACACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCAAGCACTAACCGGATGGCTTCTCCGGTGTGTGAGATCCGAACCCGACGACGTATCAAACTTACCACCCTACTCTCCTCAAAGGATGAGCAACACTCACCCGTTATTCGGACTTATCGTTCAGTGGTCAAGGCGTCTGGACGGAGTGCGCGAAAAGGCGGTGCTTGACGGTATGGACTTTTTCGCAGCCGGGATGGGATCCCTCTATGCACATCAATTGAGACAAGACTCAAGGTCGAGTTCATATAGAACAACAACGAATCAAAATGGTGGGAATATGGAAATGGTTGAAGTTGGTCATGTGGAAGAAGAAGAGGTTATGGCTCCTGAGAAACTTGCTGAAGTTGCTATAAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTGGCAGATTTTGCTTATGATTCTGCAGAGGCTTATAGTGAAGTTGTGAAGCACTGGGAGAGTGTCAAAGGCCAAAAGCATAATAATTGTAGTGAGAATAGAACATAG 2493 0.4372 MGCSQSKLDDEESVQLCKDRKKFIKQAVEQRTRFATGHIAYVESMKRVSAALRDYIEGDEPREFSLDSVVTPPFTPVKKKTNPRIANGNGNGNPRIANGNGNGNGNGNGNGFVPISAKSFAPSSIEFGVGPNSFTPSPIEYGVGPNSTLRMNYFRPGGNPAVLVEERPPSPEIVRMEAYAPMQHYGVDGYFAMQSSPPMNPSIFPYSPPNVRPNIPPPSPQNAQWDFFWNPFSSLDYYGYPNRSSHDQNGMDDEYRGLRQVREEEGIPDLEEDETEHEDYVVKRNVVEERPRNDINTNPSKEEVLVEDLDEDDEDDDDDGEEEEEDDEVGTDDETEIETETEHDAKDSQQAHGNASFEVSKNQAAGHIESSRREMEIGKQEPKEEMAGFTVYVNRRPTSMAEVINDLEAQFKTVCNAANDVSVLLEAKKAQYLLTSNEHSASKLLNPVALFRSASSRSSSSRFLVNSSTTREERCEGGKDISKEHCRLSGSHQSTLDKLNEWEKKLYEEVKCGERVRIAYEKKCKQLSNYEVKGEDPSADKTRATIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKSHSRRQQQPSISMTDPNRLARSASILETELRNWRNTFESWITSQRSYIQALTGWLLRCVRSEPDDVSNLPPYSPQRMSNTHPLFGLIVQWSRRLDGVREKAVLDGMDFFAAGMGSLYAHQLRQDSRSSSYRTTTNQNGGNMEMVEVGHVEEEEVMAPEKLAEVAIKVLCAGMSVAISSLADFAYDSAEAYSEVVKHWESVKGQKHNNCSENRT 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02427 830 MobiDBLite consensus disorder prediction 305 340 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 367 381 - -
Vivi4g02427 830 PANTHER UNCHARACTERIZED 1 815 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 82 110 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 616 635 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 75 110 - -
Vivi4g02427 830 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 277 304 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 612 635 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 350 366 - -
Vivi4g02427 830 MobiDBLite consensus disorder prediction 265 381 - -
Vivi4g02427 830 Pfam Protein of unknown function (DUF632) 400 730 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02427 Vivi-Chr4 119347332 119351224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02427 486 823 Acyl Lipid Metabolism Gene Families AT2G27090 32.647 3.09e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02427 - - vvo:131629822 1454.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02427 4 119347332 119351224 Vivi4g02427 4 119347332 119351224 ECH
Vivi1g00568 1 12443632 12446933 Vivi4g02427 4 119347332 119351224 PCT