Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00568 ATGGGATGTTCTCAATCAAAGCTGGATGATGAAGAAGCGGTTCAGATTTGTAAAGATAGAAAGAGATTCATAAAGGAGGCTGTTGAGCATAGAACTCAGTTTGCGAATGGACATGTCGCGTATATTAGGTCTCTCGAAAGGGTATCTGCTGCTTTGCTGGAGTATTTTGAAGGAGATGAAGGACTAAAGTTCTCGCTGGATTCGATCGTGACGCCGCCTGTGAAGAACGAAGCTACTCCGGAAACAATTGAGGTTGGATCGAGTACTACAGCTTTGAAAGTGAGTTACTCGAGGTCGAGTGGTAATCCAGTGATTTCGGTTGAAGAAAAGCCTCCGTCGCAGGAAATGGGTCGTGTTGAGGTGTATTCTCCTCCGAGGTACCAATATGGGAATGATGGTTATTTTGGTATGCAAGCCTCGTCTATGAATGCGTCGATTTTCGCTTATTCTCCGAATAACAGACCCGTTGCTATCCCTCCGACTTCACCACCACGGTCTTCTTCTCAGTGGGATTCCTTTTGGAATCCGTTTATGTCGTTGGACTATTACGGTTACCCTAATGGATGTAGCCTTGACGAGATTGTTATGGATGCTGAGAATCGAGAACTGAGGCAAGTTCGGGAAGAAGAAGGAATACCGGACCTGGAACATGAAGAAGAGGATACTAAAAAAGAGGGTTTTGTCGTTAAGAGAAATGTAGCAGAAGAAAGGAACGAAATCGATGTGAATTCCTCAAAAGAAGCCGTAGTTAAAGATGTCGATGAACATAAGGAAGAGAAAAAGGAGGGAACAGATGCTAAAACTGAAACTGCTCAAGTCAATGGTGGCGAGTGTTTTCAAGTATCAAAATCTCAAACTTCGGGTCATATGGAATCTAGCCATCAAGAAATTGCAATTGATAATCAAGAAGCTAACGAAGAAACACCTGGTTTTACAGTTTATGTAAACCGAAGACCGGCGAATATGGCAGAAGTGATCAAGGATCTTGAAGCTCAATTCACAGTTGTATGTAATGCAGCCAATGATGTCTCGGTACTGTTAGAGGCTAAGAAAGTTCAGCACTTATCCACTTCTAATGAACTGTCAGCATCAAGATTGTTGAATCCAGTAGCTCTTTTTCGCTCAGCTTCTTCTAGCTCGTCTCCGTCAAAAAGTATAATGAATTTTTCAAACTCTAGGGATGAAGCTTATGAAGACATCAATGATCCTCCGTCAGGGGAAGGTGGCATGTTGTCTGCCAGTCATCAATCAACGTTAGACCGGTTATATACATGGGAGAAGAAGCTCTACGAGGAAGTTAGGTCCGGAACACGGTTTCGCCTTGCGTATGAGAAGAAATGTCTGCAACTGAAGAACCATGATATAAAAGGGGAGGAGCCTTCTTCTGTGGATAAAACAAGATTAGCTATTAGAGATCTACGCACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATCGAAACCTTAAGGGATGAAGAGTTGCATCCCCAGCTTCTTAAAATGTTGCAAGGGCTAGCAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGCAAACCATGGAAGAAGTCAACATTATTCTAGACGGCATTGCTGCCCGAAAACATTCCTCCATGTCAATAACCGATCCACTGAAACTTGCACTCTCAGCCTCCATTCTTGAAACCGAGTTGAGGAACTGGCGAAACACTTTCGAGTCATGGATTTCCTCTCAGAGATCATACATTCATGCAATAACCGGCTGGCTTCTCCGATGCATGAGATGCGAACCCGATGCATCAAAATTAATATCCTCTCCTAGAAGGTCTAGCTGCAGTCATCCTTTGTTTGGACTTTGTGTTCAGTGGTCAAGACGTCTAGACGCCATACAAGAAACAGCGGTGCTTGAGGGTCTAGACTTGTTCGCAGCTGGATTAGGTTCCTTCTATTCTCAACAACTAAAAGAAGATTCTGCTCAAAATGTGATAGTTGGATCGAATGGAAATATGGAAATAGTGGAAGTTGGTAAGAAGGAAAAAGAAGAAGTGGTGGAGGTTGCGGTTAAGGTACTTTGCGGTGGAATGTCGAGTGCGATGAGCTCAATGGCAGAGTTTGCTATTGATTATGCTAAGGGATACAATGATCTTGTTAAACAATGGGAGAATGGAAAGTTGCAGGAAAATTGTGAGCCTGTGAGCCTGCAACCTGCAAAATGA 2217 0.4312 MGCSQSKLDDEEAVQICKDRKRFIKEAVEHRTQFANGHVAYIRSLERVSAALLEYFEGDEGLKFSLDSIVTPPVKNEATPETIEVGSSTTALKVSYSRSSGNPVISVEEKPPSQEMGRVEVYSPPRYQYGNDGYFGMQASSMNASIFAYSPNNRPVAIPPTSPPRSSSQWDSFWNPFMSLDYYGYPNGCSLDEIVMDAENRELRQVREEEGIPDLEHEEEDTKKEGFVVKRNVAEERNEIDVNSSKEAVVKDVDEHKEEKKEGTDAKTETAQVNGGECFQVSKSQTSGHMESSHQEIAIDNQEANEETPGFTVYVNRRPANMAEVIKDLEAQFTVVCNAANDVSVLLEAKKVQHLSTSNELSASRLLNPVALFRSASSSSSPSKSIMNFSNSRDEAYEDINDPPSGEGGMLSASHQSTLDRLYTWEKKLYEEVRSGTRFRLAYEKKCLQLKNHDIKGEEPSSVDKTRLAIRDLRTQITVSIHSVEAISRRIETLRDEELHPQLLKMLQGLAKMWKVMAECHQTQKQTMEEVNIILDGIAARKHSSMSITDPLKLALSASILETELRNWRNTFESWISSQRSYIHAITGWLLRCMRCEPDASKLISSPRRSSCSHPLFGLCVQWSRRLDAIQETAVLEGLDLFAAGLGSFYSQQLKEDSAQNVIVGSNGNMEIVEVGKKEKEEVVEVAVKVLCGGMSSAMSSMAEFAIDYAKGYNDLVKQWENGKLQENCEPVSLQPAK 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00568 738 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vivi1g00568 738 PANTHER UNCHARACTERIZED 1 720 - -
Vivi1g00568 738 Pfam Protein of unknown function (DUF632) 322 645 IPR006867 -
Vivi1g00568 738 MobiDBLite consensus disorder prediction 253 272 - -
Vivi1g00568 738 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00568 Vivi-Chr1 12443632 12446933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00568 1 81 Acyl Lipid Metabolism Gene Families AT2G27090 34.568 2.33e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00568 - - cam:101505055 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00568 1 12443632 12446933 Vivi1g00568 1 12443632 12446933 ECH
Vivi1g00568 1 12443632 12446933 Vivi4g02427 4 119347332 119351224 PCT