Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02404 ATGGGAGGGTGTTTTTCTTCAAGATCACCTTCAGCATCAAAGAAAATTCGTTTGGTTCATCTAAGTGGCTATGTAGAGGTTTTCGAGCAACCGATTTCAGTTAACCAAGTAATCACTACTAGAAATCCACCAACTCATTTTGTTTGTACCTCTCTTCAACTTCTTTCATCTTGTTCTAAACCATTGAAAGGAGATACACAGCTTCAACCAGGAAATGTGTATTTCATGTTGCCTTACTCAATTCTACAAGCTGATGTTTCGCCTGTGGACTTGGCTTCGCTTGCGAAAAGGCTCACCGCGAAGGCGAAGAGTAGTAAGTGTGAAGGTAAAAAGTCGTTGAAAGGTATTCCTTTGTCAAACCAAGATGGTTTGAGTAGTATTTGGAGTTCACCGTCGATGAGTCCCGGGAGAGTCACGGGGGCTGAGCAATTCGGTATGGCGTATGGAGGGCGGAGCACATGTAGAGGGCGGTTATGGAGACCGCTGTTGGATACTATTAGAGAGAAGTCGTTTAATAGGAGTAGTGAATCAGATTTGAAAGAAAATCAATGA 552 0.4293 MGGCFSSRSPSASKKIRLVHLSGYVEVFEQPISVNQVITTRNPPTHFVCTSLQLLSSCSKPLKGDTQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTAKAKSSKCEGKKSLKGIPLSNQDGLSSIWSSPSMSPGRVTGAEQFGMAYGGRSTCRGRLWRPLLDTIREKSFNRSSESDLKENQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02404 183 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 168 - -
Vivi4g02404 183 Pfam PADRE domain 1 168 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02404 Vivi-Chr4 118069181 118070362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02404 - - gmx:100780386 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02404 4 118069181 118070362 Vivi4g02404 4 118069181 118070362 ECH
Vivi1g00575 1 12638383 12639480 Vivi4g02404 4 118069181 118070362 PCT