Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00575 ATGGGTGTTTGTTATTCTTGCAATACATCCTCAATATTCAAAAACATGATAAGAGTAGTTCATCTCAATGGTTTTGTTGAAGATTTTTATCAACCGATTTCAGCAAGCCAAGTTATTGGTAATCTACCAAAACACTTTGTTTGTACTTCAGTACAGCTTCTATCATCATCCTACAAACCATTGAAACGAGATAACAGTCAACTCTTACCTGGTCAACTATATTTCATCCTACCATACTCAGTGCTCCAGGCGGATGTTTCTCCTATGGATTTGGCTTGCCTAGCGAGAAGGCTCACTGCAAAAGGCAAAGCCAAAAACAAACCATGTGATTACAATAAGTCACCATCAAGGAGTCCTTGTAGAGTTGGGATGGAAGAGAAAGTTATGATGAAAGGAGGAAGAAGCTCTTGTAGAGTGCAGTCATGGAAACCTATCTTGGAAAGTATTGCTGAGAAATCGCTCAACAGGAGAAGTGAATCAGATTTGCAAGAAAGTATGTGTGTAATGATTATAAGTTAG 519 0.3834 MGVCYSCNTSSIFKNMIRVVHLNGFVEDFYQPISASQVIGNLPKHFVCTSVQLLSSSYKPLKRDNSQLLPGQLYFILPYSVLQADVSPMDLACLARRLTAKGKAKNKPCDYNKSPSRSPCRVGMEEKVMMKGGRSSCRVQSWKPILESIAEKSLNRRSESDLQESMCVMIIS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00575 172 Pfam PADRE domain 1 151 IPR025322 -
Vivi1g00575 172 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00575 Vivi-Chr1 12638383 12639480 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00575 - - vvo:131601180 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00575 1 12638383 12639480 Vivi1g00575 1 12638383 12639480 ECH
Vivi1g00575 1 12638383 12639480 Vivi4g02404 4 118069181 118070362 PCT