Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02367 ATGGGAACATTTACAAGTTTCAGAAAAGCCTATGGAGCTCTCAAAGACTCCACCAAAGTTGGCCTTGCCAAAGTTAATAGCGATTACAAGGACTTGGATATTGCTATTGTGAAAGCTACCAATCATGTTGAATATCCTCCAAAGGAACGTCATGTTAGAAAAATATTCTATGCAACATCAGCGCACCAACCACGCGCGGATGTGGCATACTGCATTCATAAACTTTCCAAGAGACTTTCAAAGACGCGAAATTGGATAGTTGCTATAAAGACATTGATAGTGATTCATAGGACTTTGAGAGAGGGTGATCCTACATTCAGAGAAGAACTTTTAAACTACTCGCGCAGGGGACATATTCTCCAAATATCGAATTTTAAAGACGATTCAAGCCCTTTAGCTTGGGATTGTTCTGCTTGGGTTCGAACCTACGCATTATATTTAGAAGAAAGACTCGAATGTTTTAGAATCCTTAAATATGATATCGAATCAGAACGTTTAATAAAATCATCACCGGCTTCAGCTAAAGCACATAGCAGAACTCGGTCGTTGGCTAATGACGATCTGTTGGAACAGCTACCAGCATTGCAACAACTTTTATTCCGCCTTATCGGTTGTCAGCCTGAAGGATGTGCTTATAACAATTATCTAGTACAGTATGCATTGGCCTTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCACTCAATGATGGAATCATCAATCTTGTAGACATGTTCTTTGAAACTACTAGACATGATGCAGTGAAGGCTTTAAATGTATATAAAAGAGCTGGCCAACAGGCTGAAAGTCTCGCCGATTTTTATGAATATTGTAAAGGCTTGGACCTTGCTAGGAATTTTCAGTTTCCAACGCTAAGACAGCCGCCGCCATCTTTCCTTGCTACAATGGAAGAATATATTAGAGAAACTCCTCAACCAGGCTCTGAGAACAAGAGATTGGAGTATCAGGAAAATGAAAAATCGTCTGAAGAAGAATCAGAGCCAAAAGAAGTCGAAGAACCTCAAGAAGAAGAGAAGCAAGAAGAGGAAGTCGTCACTGAGGAGGAAGAAGAAGTAGTACCCGAGGAAGAAATACAACCTGAGGAAGAGAAGGTTGAGTCTCCTCCACTGATATCAACCGATGGTACCGATGATTTACTGGGTCTGAATGAAATAAATCCTAAAGCTCTAGAAATGGAAGATAGCAATGCATTGGCTCTTGCAATTGTACCACCTGGTGGAAATCATAATTCAAACAATCTTGCATTGAGTAACATTACGGGAACTTCTGGGTGGGAACTTTCACTGGTTACAAACCCAAGTAACCATAATAGTCAACCTCCAGATCGCAGAATGGCCGGTGGTTTTGACACGCTATTACTAGACAGTTTATACGAAGACGAACATGCAAGAAGACAACTCCAACTTCAAAATGCAGGTTATGGACATGAAGAAATGAATGTACAAAATCCATTTGATCATTATAATCAACACGATCCGTTTGCAACGTCGAAGAACATAGCACCTCCAACCAATGTTCAAATGGCAATGATGGCTCAACAACAACAGCAACAACAAATGATGTACCAACAACAACAACACCAACATATGATGTATCCACATCAACATCATCATCATCATCAACATAACAACATGGAAATGGTGCTTCACCCGCAACAACCTCATCATGGTCAATACCCTCAACACCCTCAACAGATGCAGATGATGGGGAATCATAATCCATTTGGAGATCCTTTACCTGTCCCTAATTATCCTCATAACTCAATGCATCACCAAGGGAATTACAATTTAATGTAG 1818 0.401 MGTFTSFRKAYGALKDSTKVGLAKVNSDYKDLDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLSKTRNWIVAIKTLIVIHRTLREGDPTFREELLNYSRRGHILQISNFKDDSSPLAWDCSAWVRTYALYLEERLECFRILKYDIESERLIKSSPASAKAHSRTRSLANDDLLEQLPALQQLLFRLIGCQPEGCAYNNYLVQYALALVLKESFKIYCALNDGIINLVDMFFETTRHDAVKALNVYKRAGQQAESLADFYEYCKGLDLARNFQFPTLRQPPPSFLATMEEYIRETPQPGSENKRLEYQENEKSSEEESEPKEVEEPQEEEKQEEEVVTEEEEEVVPEEEIQPEEEKVESPPLISTDGTDDLLGLNEINPKALEMEDSNALALAIVPPGGNHNSNNLALSNITGTSGWELSLVTNPSNHNSQPPDRRMAGGFDTLLLDSLYEDEHARRQLQLQNAGYGHEEMNVQNPFDHYNQHDPFATSKNIAPPTNVQMAMMAQQQQQQQMMYQQQQHQHMMYPHQHHHHHQHNNMEMVLHPQQPHHGQYPQHPQQMQMMGNHNPFGDPLPVPNYPHNSMHHQGNYNLM 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02367 605 Gene3D ANTH domain 173 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vivi4g02367 605 SMART enth_2 30 161 IPR013809 -
Vivi4g02367 605 MobiDBLite consensus disorder prediction 309 385 - -
Vivi4g02367 605 FunFam Putative clathrin assembly protein 173 321 - -
Vivi4g02367 605 Gene3D - 5 161 IPR008942 -
Vivi4g02367 605 MobiDBLite consensus disorder prediction 311 334 - -
Vivi4g02367 605 SUPERFAMILY GAT-like domain 178 309 - -
Vivi4g02367 605 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Vivi4g02367 605 FunFam Clathrin assembly protein AP180 6 161 - -
Vivi4g02367 605 CDD ANTH_N 32 154 - -
Vivi4g02367 605 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Vivi4g02367 605 MobiDBLite consensus disorder prediction 335 369 - -
Vivi4g02367 605 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 527 IPR045192 GO:0048268|GO:0072583
Vivi4g02367 605 SUPERFAMILY ENTH/VHS domain 30 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02367 Vivi-Chr4 117029673 117033436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02367 K20044 - gmx:100783084 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02367 4 117029673 117033436 Vivi4g02367 4 117029673 117033436 ECH
Vivi1g00616 1 13461442 13465510 Vivi4g02367 4 117029673 117033436 PCT