Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02094 ATGGCTTCCACTTCTGCAGTTTCAATGTCAATGCCACTAACATACACCTACCAGAAGAGGGTGGTGAATAGCTCTGAGGTATTCTTCAATCCATTGCCTCTACGGTCTTCAAAGGCTATAACAACGTCAAAACGCAGTGGAAGATTTCAAGTCAGGGCCTCCATGAAGGAAAAAGTTGTGACACGACTCACAGCAGCAGCATTGACAGCTTCAATGATGGCTCCTGATGTGGCTGAAGCAGCTGTTTCACCTTCTCTCAAGAACTTCTTGCTCAGCATCGCGGCTGGTGGAGCCGTGGTTCTAGTTATCATTGGTGCTGTCGTTGCTGTATCCAATTTCGATCCTGTCAAGCGACGCTGA 360 0.4778 MASTSAVSMSMPLTYTYQKRVVNSSEVFFNPLPLRSSKAITTSKRSGRFQVRASMKEKVVTRLTAAALTASMMAPDVAEAAVSPSLKNFLLSIAAGGAVVLVIIGAVVAVSNFDPVKRR 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02094 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 118 IPR009518 GO:0009523|GO:0015979|GO:0016020
Vivi4g02094 119 Gene3D Single helix bin 81 119 - -
Vivi4g02094 119 PANTHER OS07G0673550 PROTEIN 1 118 - -
Vivi4g02094 119 FunFam Photosystem II psbX protein 81 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02094 Vivi-Chr4 102334441 102335190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02094 - - gmx:100306291 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00767 1 16519283 16519885 Vivi4g02094 4 102334441 102335190 PCT