Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00767 ATGGCTTCAACTTCAATAATCTCAATGGCCGTGCCAGTAACCTGTACCTCCACCAAGAAGTTAGAGTCACCAACCTCTCACGCATTCTTGAAGGCACCATTGACTCTAAGGCCATCATCAAAGTCAAACGGAAGGTTCCAAGTGAAAGCTTCGCTGAAGGAGAAAGTTGTGACAGGGCTGACAGCAGCTGCATTGACAGCTCAAATGGTGATTCCTGATGTGGCCGAAGCTGCTACCGTTTCACCTTCTTTGAAGAATTTCTTGCTCAGTATTGTCTCTGGTGGAGTTGTGGTTACTGCCATTCTTGGGGCTGTTATCGGTGTTTCCAATTTCGATCCTGTCAAGCGAGGCTGA 354 0.4746 MASTSIISMAVPVTCTSTKKLESPTSHAFLKAPLTLRPSSKSNGRFQVKASLKEKVVTGLTAAALTAQMVIPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00767 117 PANTHER OS07G0673550 PROTEIN 1 117 - -
Vivi1g00767 117 Gene3D Single helix bin 79 117 - -
Vivi1g00767 117 FunFam Photosystem II psbX protein 79 117 - -
Vivi1g00767 117 Pfam Photosystem II reaction centre X protein (PsbX) 80 116 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00767 Vivi-Chr1 16519283 16519885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00767 - - rcu:8268448 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00767 1 16519283 16519885 Vivi1g00767 1 16519283 16519885 ECH
Vivi1g00767 1 16519283 16519885 Vivi4g02094 4 102334441 102335190 PCT