Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02087 ATGATCAACGAGATGCAGTCCTTAGTCACACTTGAACAAGTTCGTCACCTTACTCTAGGACCAATCCTAACCAACAACGAAAGTATCTCAACAACGATACCTATTTCGGATCTTCGTTACACTCACTTGTTCCATAGTCGTTATGATTCTGAAGAGGATCTACAAACATATAATGTCCACTCTAAACATATAAATGCGGTTAGAGGCTTTATTTTTCCTATCTGCGATGATCTTTTAGTCGTGGACTGGATAGGCGGAGAGGTTGCTCTCCCGCCACATCCTTCGCCCGGTACTGCATTCCGGGTGAGTTTCTTGAAACTCAAGGAAGAGAATGAGAAAGACGGTGAAGTTAAGGAGGAGGTTTTTCGTGCTATTCGAGGTATTAAGGAGAGTAATGGAGGAGTTAATTATGTTTCTTATGGTGAAAATATATCTCCGGCGAGGGCGAAGGGGTTATCTATAGCTTCGCTTGTGGTTTTTGCAGGACGGGAGGAGTTGGAGAGTGTGGATGCTGGTGAAGGTTTGGTTAAGGTTAAGGAGCATTTGGAAAGTGTGGTGGTGGTTGATTATGTGGTTCCTTTGAAGTAG 588 0.4354 MINEMQSLVTLEQVRHLTLGPILTNNESISTTIPISDLRYTHLFHSRYDSEEDLQTYNVHSKHINAVRGFIFPICDDLLVVDWIGGEVALPPHPSPGTAFRVSFLKLKEENEKDGEVKEEVFRAIRGIKESNGGVNYVSYGENISPARAKGLSIASLVVFAGREELESVDAGEGLVKVKEHLESVVVVDYVVPLK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02087 195 Pfam Stress responsive A/B Barrel Domain 31 83 IPR013097 -
Vivi4g02087 195 Pfam Stress responsive A/B Barrel Domain 101 192 IPR013097 -
Vivi4g02087 195 ProSiteProfiles Stress-response A/B barrel domain profile. 99 195 IPR013097 -
Vivi4g02087 195 Gene3D - 1 84 - -
Vivi4g02087 195 Gene3D - 100 192 - -
Vivi4g02087 195 ProSiteProfiles Stress-response A/B barrel domain profile. 1 83 IPR013097 -
Vivi4g02087 195 SUPERFAMILY Dimeric alpha+beta barrel 101 192 IPR011008 -
Vivi4g02087 195 SUPERFAMILY Dimeric alpha+beta barrel 11 84 IPR011008 -
Vivi4g02087 195 PANTHER - 1 192 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02087 Vivi-Chr4 102039991 102040578 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02087 - - psat:127105917 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02087 4 102039991 102040578 Vivi4g02087 4 102039991 102040578 ECH
Vivi1g00771 1 16586873 16587885 Vivi4g02087 4 102039991 102040578 PCT